RNA–Protein interactions for RNA: YDL170W

UGA3, Transcript of Transcriptional activator for GABA-dependent induction of GABA genes, yeast

Gene UGA3, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA3	YDL170W	TAD1	P53065	400 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	CBK1	P53894	756 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	FCP1	Q03254	732 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	YDR514C	Q04408	483 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	UTP21	Q06078	939 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	APL5	Q08951	932 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	ACM1	Q08981	209 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	NUR1	Q12066	484 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	SFI1	Q12369	946 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	LEU2	P04173	364 aa	Predicted RBP	4.56	□□□□□ -1.68
UGA3	YDL170W	NUC1	P08466	329 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	CDC6	P09119	513 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	CDC16	P09798	840 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	DBP2	P24783	546 aa	Known RBP	4.56	□□□□□ -1.68
UGA3	YDL170W	PER1	P25625	357 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	EMC3	P36039	253 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	HXT6	P39003	570 aa	Known RBP	4.56	□□□□□ -1.68
UGA3	YDL170W	HXT7	P39004	570 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	SPC72	P39723	622 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	SAP4	P53036	818 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	ARC35	P53731	342 aa	Known RBP	4.56	□□□□□ -1.68
UGA3	YDL170W	VPS9	P54787	451 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	VID22	Q05934	901 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	VHS3	Q08438	674 aa		4.56	□□□□□ -1.68
UGA3	YDL170W	SNF1	P06782	633 aa	Known RBP	4.55	□□□□□ -1.68
UGA3	YDL170W	MTF2	P10849	440 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	PMS1	P14242	873 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
UGA3	YDL170W	NPP1	P25353	742 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	CCR4	P31384	837 aa	Known RBP	4.55	□□□□□ -1.68
UGA3	YDL170W	SDS22	P36047	338 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	APM3	P38153	483 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	AXL2	P38928	823 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	DJP1	P40564	432 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	GCV2	P49095	1034 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	NIT3	P49954	291 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	MCM6	P53091	1017 aa	Known RBP	4.55	□□□□□ -1.68
UGA3	YDL170W	NCS2	P53923	493 aa	Predicted RBP	4.55	□□□□□ -1.68
UGA3	YDL170W	YAP6	Q03935	383 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	YMR111C	Q04461	462 aa	Predicted RBP	4.55	□□□□□ -1.68
UGA3	YDL170W	HFI1	Q12060	488 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	ISA2	Q12425	185 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	APM4	Q99186	491 aa		4.55	□□□□□ -1.68
UGA3	YDL170W	QCR6	P00127	147 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	RPC40	P07703	335 aa	Known RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	GUK1	P15454	187 aa	Known RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	CKA1	P15790	372 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	PHO3	P24031	467 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	EMC1	P25574	760 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	YCL049C	P25577	312 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	RPN2	P32565	945 aa	Known RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	SLA2	P33338	968 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	LST4	P34239	828 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	ERT1	P38140	529 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	TIF4631	P39935	952 aa	Known RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	LSM5	P40089	93 aa	Known RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	YIL092W	P40497	633 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	ARF3	P40994	183 aa	RIP-Chip data	4.54	□□□□□ -1.68	not detected
UGA3	YDL170W	RMD8	P43620	662 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	CCM1	P48237	864 aa	Predicted RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	MNN10	P50108	393 aa	Known RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	VPS62	P53285	467 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	TIM11	P81449	96 aa	Predicted RBP	4.54	□□□□□ -1.68
UGA3	YDL170W	SEC5	P89102	971 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	YPL071C	Q02864	156 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	MSC2	Q03455	724 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	YMR155W	Q03795	547 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	MFB1	Q04922	465 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	OMS1	Q06668	471 aa		4.54	□□□□□ -1.68
UGA3	YDL170W	ILS1	P09436	1072 aa	Known RBP	4.53	□□□□□ -1.68
UGA3	YDL170W	MDL1	P33310	695 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	OAF3	P36023	863 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	UME6	P39001	836 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	YER010C	P40011	234 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	KHA1	P40309	873 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	YJL068C	P40363	299 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	UBP7	P40453	1071 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	RRT14	P40470	206 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	MAD3	P47074	515 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	UBC9	P50623	157 aa	Predicted RBP	4.53	□□□□□ -1.68
UGA3	YDL170W	HFM1	P51979	1187 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UGA3	YDL170W	CDC45	Q08032	650 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	DCS2	Q12123	353 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	PNS1	Q12412	539 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UGA3	YDL170W	RPS21B	Q3E754	87 aa	Known RBP	4.53	□□□□□ -1.68
UGA3	YDL170W	UFD4	P33202	1483 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	NUM1	Q00402	2748 aa		4.53	□□□□□ -1.68
UGA3	YDL170W	FUM1	P08417	488 aa	Known RBP	4.53	□□□□□ -1.69
UGA3	YDL170W	STE11	P23561	717 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	MNE1	P24720	663 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	HCM1	P25364	564 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	AFR1	P33304	620 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	TRM2	P33753	639 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	YBR225W	P38321	900 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	PNT1	P38969	423 aa		4.53	□□□□□ -1.69
UGA3	YDL170W	FYV8	P46949	817 aa	Known RBP	4.53	□□□□□ -1.69
UGA3	YDL170W	PRP42	Q03776	544 aa	Known RBP	4.53	□□□□□ -1.69
UGA3	YDL170W	YLR224W	Q05947	369 aa		4.53	□□□□□ -1.69

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