RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MRPL1Q04599 285 aa2.34□□□□□ -2.03
CDC36YDL165W PHO2P07269 559 aa2.33□□□□□ -2.04
CDC36YDL165W KIN82P25341 720 aa2.33□□□□□ -2.04
CDC36YDL165W GSY2P27472 705 aa2.33□□□□□ -2.04
CDC36YDL165W YIL024CP40543 189 aa2.33□□□□□ -2.04
CDC36YDL165W CAF16P43569 289 aa2.33□□□□□ -2.04
CDC36YDL165W YIP4P53093 235 aa2.33□□□□□ -2.04
CDC36YDL165W COQ6P53318 479 aa2.33□□□□□ -2.04
CDC36YDL165W NHX1Q04121 633 aa2.33□□□□□ -2.04
CDC36YDL165W SNA4Q07549 140 aa2.33□□□□□ -2.04
CDC36YDL165W SEC3P33332 1336 aaKnown RBP2.33□□□□□ -2.04
CDC36YDL165W YPT1P01123 206 aaKnown RBP2.32□□□□□ -2.04
CDC36YDL165W ATO2P32907 282 aa2.32□□□□□ -2.04
CDC36YDL165W SDS24P38314 527 aa2.32□□□□□ -2.04
CDC36YDL165W GDH3P39708 457 aa2.32□□□□□ -2.04
CDC36YDL165W ENT2Q05785 613 aa2.32□□□□□ -2.04
CDC36YDL165W RDL1Q12305 139 aaKnown RBP2.32□□□□□ -2.04
CDC36YDL165W CDC9P04819 755 aa2.31□□□□□ -2.04
CDC36YDL165W RPS9BP05755 195 aaKnown RBP2.31□□□□□ -2.04
CDC36YDL165W YCP4P25349 247 aaKnown RBP2.31□□□□□ -2.04
CDC36YDL165W MNN4P36044 1178 aa2.31□□□□□ -2.04
CDC36YDL165W MRPL7P36519 292 aa2.31□□□□□ -2.04
CDC36YDL165W SSZ1P38788 538 aaKnown RBP2.31□□□□□ -2.04
CDC36YDL165W YDL073WQ07454 984 aa2.31□□□□□ -2.04
CDC36YDL165W CIT2P08679 460 aa2.3□□□□□ -2.04
CDC36YDL165W WHI2P12611 486 aa2.3□□□□□ -2.04
CDC36YDL165W FRS1P15624 595 aaKnown RBP2.3□□□□□ -2.04
CDC36YDL165W GAL11P19659 1081 aa2.3□□□□□ -2.04
CDC36YDL165W CNE1P27825 502 aa2.3□□□□□ -2.04
CDC36YDL165W YOX1P34161 385 aa2.3□□□□□ -2.04
CDC36YDL165W YHR202WP38887 602 aa2.3□□□□□ -2.04
CDC36YDL165W CFD1P40558 293 aa2.3□□□□□ -2.04
CDC36YDL165W YFL015CP43578 164 aa2.3□□□□□ -2.04
CDC36YDL165W LYS20P48570 428 aaKnown RBP2.3□□□□□ -2.04
CDC36YDL165W MAL11P53048 616 aa2.3□□□□□ -2.04
CDC36YDL165W VHS3Q08438 674 aa2.3□□□□□ -2.04
CDC36YDL165W YEL076C-AP0CX16 216 aa2.29□□□□□ -2.04
CDC36YDL165W YLR464WP0CX17 216 aa2.29□□□□□ -2.04
CDC36YDL165W HOG1P32485 435 aa2.29□□□□□ -2.04
CDC36YDL165W PET127P32606 800 aa2.29□□□□□ -2.04
CDC36YDL165W MET30P39014 640 aa2.29□□□□□ -2.04
CDC36YDL165W YEL076CP39971 216 aa2.29□□□□□ -2.04
CDC36YDL165W TMN3P40071 706 aa2.29□□□□□ -2.04
CDC36YDL165W YJR039WP47107 1121 aa2.29□□□□□ -2.04
CDC36YDL165W RPL15BP54780 204 aaPredicted RBP2.29□□□□□ -2.04
CDC36YDL165W MFM1Q02783 413 aa2.29□□□□□ -2.04
CDC36YDL165W PPE1P38796 400 aa2.28□□□□□ -2.04
CDC36YDL165W HUL5P53119 910 aa2.28□□□□□ -2.04
CDC36YDL165W COP1P53622 1201 aaKnown RBP2.28□□□□□ -2.04
CDC36YDL165W BUD17P53727 317 aa2.28□□□□□ -2.04
CDC36YDL165W AAT1Q01802 451 aa2.28□□□□□ -2.04
CDC36YDL165W VBA4Q04602 768 aaKnown RBP2.28□□□□□ -2.04
CDC36YDL165W SPN1Q06505 410 aaPredicted RBP2.28□□□□□ -2.04
CDC36YDL165W SRP40P32583 406 aaPredicted RBP2.27□□□□□ -2.05
CDC36YDL165W NUG1P40010 520 aaKnown RBP2.27□□□□□ -2.05
CDC36YDL165W SAE2P46946 345 aa2.27□□□□□ -2.05
CDC36YDL165W YGL260WP53056 76 aa2.27□□□□□ -2.05
CDC36YDL165W RCR2Q03446 210 aaKnown RBP2.27□□□□□ -2.05
CDC36YDL165W EFR3Q03653 782 aaKnown RBP2.27□□□□□ -2.05
CDC36YDL165W TPO3Q06451 622 aa2.27□□□□□ -2.05
CDC36YDL165W YPL216WQ08964 1102 aa2.27□□□□□ -2.05
CDC36YDL165W AIM44Q99299 758 aa2.27□□□□□ -2.05
CDC36YDL165W AIM17P23180 465 aaKnown RBP2.26□□□□□ -2.05
CDC36YDL165W IMG2P25642 146 aaPredicted RBP2.26□□□□□ -2.05
CDC36YDL165W TDA10P42938 290 aa2.26□□□□□ -2.05
CDC36YDL165W GPD1Q00055 391 aaKnown RBP2.26□□□□□ -2.05
CDC36YDL165W NRT1Q08485 598 aa2.26□□□□□ -2.05
CDC36YDL165W DCS2Q12123 353 aa2.26□□□□□ -2.05
CDC36YDL165W MDM12Q92328 271 aa2.26□□□□□ -2.05
CDC36YDL165W RNR3P21672 869 aaKnown RBP2.25□□□□□ -2.05
CDC36YDL165W YCR043CP25361 127 aa2.25□□□□□ -2.05
CDC36YDL165W MDV1P47025 714 aa2.25□□□□□ -2.05
CDC36YDL165W RPS15Q01855 142 aaKnown RBP2.25□□□□□ -2.05
CDC36YDL165W CEF1Q03654 590 aaPredicted RBP2.25□□□□□ -2.05
CDC36YDL165W GFD1Q04839 188 aaKnown RBP2.25□□□□□ -2.05
CDC36YDL165W GRS2Q06817 618 aa2.25□□□□□ -2.05
CDC36YDL165W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
CDC36YDL165W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
CDC36YDL165W PRP22P24384 1145 aaKnown RBP2.24□□□□□ -2.05
CDC36YDL165W ARC40P38328 384 aaKnown RBP2.24□□□□□ -2.05
CDC36YDL165W GND1P38720 489 aaKnown RBP2.24□□□□□ -2.05
CDC36YDL165W MTG2P38860 518 aa2.24□□□□□ -2.05
CDC36YDL165W BEM4P39011 633 aa2.24□□□□□ -2.05
CDC36YDL165W DOT6P40059 670 aaKnown RBP2.24□□□□□ -2.05
CDC36YDL165W YIL152WP40455 235 aa2.24□□□□□ -2.05
CDC36YDL165W YIR016WP40572 265 aa2.24□□□□□ -2.05
CDC36YDL165W IRC7P43623 340 aa2.24□□□□□ -2.05
CDC36YDL165W YJL049WP47048 450 aa2.24□□□□□ -2.05
CDC36YDL165W SAP4P53036 818 aa2.24□□□□□ -2.05
CDC36YDL165W YGR054WP53235 642 aaKnown RBP2.24□□□□□ -2.05
CDC36YDL165W YPL071CQ02864 156 aa2.24□□□□□ -2.05
CDC36YDL165W FDC1Q03034 503 aa2.24□□□□□ -2.05
CDC36YDL165W SRD1P09007 221 aa2.23□□□□□ -2.05
CDC36YDL165W IME1P21190 360 aa2.23□□□□□ -2.05
CDC36YDL165W RTT107P38850 1070 aa2.23□□□□□ -2.05
CDC36YDL165W BOP3P53958 396 aa2.23□□□□□ -2.05
CDC36YDL165W TIM50Q02776 476 aa2.23□□□□□ -2.05
CDC36YDL165W WAR1Q03631 944 aa2.23□□□□□ -2.05
CDC36YDL165W PCL8Q08966 492 aa2.23□□□□□ -2.05
CDC36YDL165W HMG1P12683 1054 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms