RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	HSH155	P49955	971 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	YNL108C	P53929	270 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	HDA1	P53973	706 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	MRPS17	Q03246	237 aa	Predicted RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	TUM1	Q08686	304 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	DAS2	Q12084	232 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	ATG29	Q12092	213 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	YDL109C	Q12103	647 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	RAV1	P47104	1357 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	TY1B-DR4	Q07793	1604 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	PDE2	P06776	526 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	RAP1	P11938	827 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	YAK1	P14680	807 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	DBP2	P24783	546 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	PTP1	P25044	335 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	KCC4	P25389	1037 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	PRP40	P33203	583 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	MRPL17	P36528	281 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	GRS1	P38088	690 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	YAP3	P38749	330 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	YHI9	P38765	294 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	NUP60	P39705	539 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	GIM4	P40005	111 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	EMP65	P40085	556 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	AIR1	P40507	360 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	YIL077C	P40508	320 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	TED1	P40533	473 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	CSN12	P47130	423 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	ASE1	P50275	885 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	SLT2	Q00772	484 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	EMI2	Q04409	500 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	MCM21	Q06675	368 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	CMS1	Q07897	291 aa	Known RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	YEH2	Q07950	538 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	ENV9	Q08651	330 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	FMP40	Q08968	688 aa	Predicted RBP	5.99	□□□□□ -1.45
SUB2	YDL084W	AEP3	Q12089	606 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	TAH18	Q12181	623 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	MDY2	Q12285	212 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	MMP1	Q12372	583 aa		5.99	□□□□□ -1.45
SUB2	YDL084W	CAR2	P07991	424 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	PCT1	P13259	424 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	TAL1	P15019	335 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	KIN3	P22209	435 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	HSP30	P25619	332 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	NAM9	P27929	486 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	DBF20	P32328	564 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	AFG2	P32794	780 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	SMC1	P32908	1225 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	APM3	P38153	483 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	YBL036C	P38197	257 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	GDT1	P38301	280 aa	Predicted RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	RPN10	P38886	268 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	MNL1	P38888	796 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	HXT6	P39003	570 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	HXT7	P39004	570 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	FCY21	P40039	528 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	SHQ1	P40486	507 aa	Predicted RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	AXL1	P40851	1208 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	MDJ2	P42834	146 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	HLJ1	P48353	224 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	TEL2	P53038	688 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	RBG2	P53295	368 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	DSE4	P53753	1117 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	MRPL19	P53875	158 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	PEX25	Q02969	394 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	SSL1	Q04673	461 aa	Predicted RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	KAP95	Q06142	861 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	LCB5	Q06147	687 aa	Known RBP	5.98	□□□□□ -1.45
SUB2	YDL084W	RRT8	Q08219	342 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	HOS1	Q12214	470 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	GPR1	Q12361	961 aa		5.98	□□□□□ -1.45
SUB2	YDL084W	PEP1	P32319	1579 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	YPR089W	O13585	888 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	MATALPHA2	P0CY08	210 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	HMLALPHA2	P0CY09	210 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	PDX1	P16451	410 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	SEC62	P21825	274 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	PEX1	P24004	1043 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	MNE1	P24720	663 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	MSN4	P33749	630 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	MRPL37	P36532	105 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	BMT2	P38278	337 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	APM2	P38700	605 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	GIP4	P39732	760 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	DLD2	P46681	530 aa	Known RBP	5.97	□□□□□ -1.45
SUB2	YDL084W	YJR039W	P47107	1121 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	GCV2	P49095	1034 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	YKE2	P52553	114 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	PAN2	P53010	1115 aa	Predicted RBP	5.97	□□□□□ -1.45
SUB2	YDL084W	YGL117W	P53133	265 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	CWC24	P53769	259 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	KRE33	P53914	1056 aa	Known RBP	5.97	□□□□□ -1.45
SUB2	YDL084W	SAM50	P53969	484 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	HEF3	P53978	1044 aa	Known RBP	5.97	□□□□□ -1.45
SUB2	YDL084W	ALO1	P54783	526 aa	Known RBP	5.97	□□□□□ -1.45
SUB2	YDL084W	TOF2	Q02208	771 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	SRL4	Q03085	281 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	USA1	Q03714	838 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	TAF12	Q03761	539 aa		5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms