RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W RIC1P40395 1056 aa7.41□□□□□ -1.22
TOD6YBL054W MKT1P40850 830 aaKnown RBP7.41□□□□□ -1.22
TOD6YBL054W SBE2P42223 864 aaKnown RBP7.41□□□□□ -1.22
TOD6YBL054W SAE2P46946 345 aa7.41□□□□□ -1.22
TOD6YBL054W LSB1P53281 241 aa7.41□□□□□ -1.22
TOD6YBL054W TFB3Q03290 321 aa7.41□□□□□ -1.22
TOD6YBL054W SAS4Q04003 481 aa7.41□□□□□ -1.22
TOD6YBL054W BUD22Q04347 519 aaKnown RBP7.41□□□□□ -1.22
TOD6YBL054W PRM6Q04705 352 aa7.41□□□□□ -1.22
TOD6YBL054W ADE13Q05911 482 aaKnown RBP7.41□□□□□ -1.22
TOD6YBL054W MCM21Q06675 368 aa7.41□□□□□ -1.22
TOD6YBL054W NTO1Q12311 748 aa7.41□□□□□ -1.22
TOD6YBL054W GPR1Q12361 961 aa7.41□□□□□ -1.22
TOD6YBL054W GCN3P14741 305 aa7.4□□□□□ -1.22
TOD6YBL054W URE2P23202 354 aaKnown RBP7.4□□□□□ -1.22
TOD6YBL054W PRE8P23639 250 aa7.4□□□□□ -1.22
TOD6YBL054W GFD2P25370 566 aaKnown RBP7.4□□□□□ -1.22
TOD6YBL054W ADP1P25371 1049 aa7.4□□□□□ -1.22
TOD6YBL054W TFC1P32367 649 aa7.4□□□□□ -1.22
TOD6YBL054W RPT5P33297 434 aaKnown RBP7.4□□□□□ -1.22
TOD6YBL054W CSE1P33307 960 aa7.4□□□□□ -1.22
TOD6YBL054W TPO5P36029 618 aa7.4□□□□□ -1.22
TOD6YBL054W RRN3P36070 627 aa7.4□□□□□ -1.22
TOD6YBL054W MSR1P38714 643 aa7.4□□□□□ -1.22
TOD6YBL054W CHS6P40955 746 aa7.4□□□□□ -1.22
TOD6YBL054W FAR3P46671 204 aa7.4□□□□□ -1.22
TOD6YBL054W COG2P53271 262 aa7.4□□□□□ -1.22
TOD6YBL054W YTP1P53584 459 aa7.4□□□□□ -1.22
TOD6YBL054W ADE12P80210 433 aaKnown RBP7.4□□□□□ -1.22
TOD6YBL054W CWC15Q03772 175 aaKnown RBP7.4□□□□□ -1.22
TOD6YBL054W RAD30Q04049 632 aa7.4□□□□□ -1.22
TOD6YBL054W IVY1Q04934 453 aa7.4□□□□□ -1.22
TOD6YBL054W FMP42Q04991 504 aa7.4□□□□□ -1.22
TOD6YBL054W ASA1Q06822 443 aa7.4□□□□□ -1.22
TOD6YBL054W YET3Q07451 203 aa7.4□□□□□ -1.22
TOD6YBL054W MCH5Q08777 521 aa7.4□□□□□ -1.22
TOD6YBL054W YIG1Q08956 461 aa7.4□□□□□ -1.22
TOD6YBL054W YDR018CQ12185 396 aa7.4□□□□□ -1.22
TOD6YBL054W RRP36Q12481 300 aaPredicted RBP7.4□□□□□ -1.22
TOD6YBL054W ATP2P00830 511 aaKnown RBP7.39□□□□□ -1.23
TOD6YBL054W SRD1P09007 221 aa7.39□□□□□ -1.23
TOD6YBL054W HSF1P10961 833 aa7.39□□□□□ -1.23
TOD6YBL054W SPR1P32603 445 aa7.39□□□□□ -1.23
TOD6YBL054W YDR089WP38966 869 aa7.39□□□□□ -1.23
TOD6YBL054W SWP82P43554 623 aa7.39□□□□□ -1.23
TOD6YBL054W SAD1P43589 448 aa7.39□□□□□ -1.23
TOD6YBL054W YGL176CP46945 554 aa7.39□□□□□ -1.23
TOD6YBL054W EMC2P47133 292 aaKnown RBP7.39□□□□□ -1.23
TOD6YBL054W DIP5P53388 608 aa7.39□□□□□ -1.23
TOD6YBL054W RPA49Q01080 415 aaPredicted RBP7.39□□□□□ -1.23
TOD6YBL054W YDR239CQ03780 787 aa7.39□□□□□ -1.23
TOD6YBL054W SMP3Q04174 516 aa7.39□□□□□ -1.23
TOD6YBL054W SKG3Q06315 1026 aa7.39□□□□□ -1.23
TOD6YBL054W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
TOD6YBL054W VCX1Q99385 411 aa7.39□□□□□ -1.23
TOD6YBL054W TIF1P10081 395 aaKnown RBP7.38□□□□□ -1.23
TOD6YBL054W SAM2P19358 384 aaKnown RBP7.38□□□□□ -1.23
TOD6YBL054W DAL2P25335 343 aa7.38□□□□□ -1.23
TOD6YBL054W BRF1P29056 596 aa7.38□□□□□ -1.23
TOD6YBL054W AFG2P32794 780 aa7.38□□□□□ -1.23
TOD6YBL054W PET112P33893 541 aa7.38□□□□□ -1.23
TOD6YBL054W GIP1P38229 639 aa7.38□□□□□ -1.23
TOD6YBL054W GGA2P38817 585 aaKnown RBP7.38□□□□□ -1.23
TOD6YBL054W APE4P38821 490 aa7.38□□□□□ -1.23
TOD6YBL054W NDT80P38830 627 aa7.38□□□□□ -1.23
TOD6YBL054W MAD3P47074 515 aa7.38□□□□□ -1.23
TOD6YBL054W ARK1P53974 638 aa7.38□□□□□ -1.23
TOD6YBL054W SKI8Q02793 397 aaPredicted RBP7.38□□□□□ -1.23
TOD6YBL054W MMT1Q03218 510 aa7.38□□□□□ -1.23
TOD6YBL054W YET2Q04210 160 aa7.38□□□□□ -1.23
TOD6YBL054W ATG26Q06321 1198 aa7.38□□□□□ -1.23
TOD6YBL054W CUR1Q06469 252 aa7.38□□□□□ -1.23
TOD6YBL054W SMC5Q08204 1093 aa7.38□□□□□ -1.23
TOD6YBL054W HRT3Q12347 344 aa7.38□□□□□ -1.23
TOD6YBL054W STB3Q12427 513 aa7.38□□□□□ -1.23
TOD6YBL054W TEF1P02994 458 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W THR1P17423 357 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W UBA1P22515 1024 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W URA7P28274 579 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W YBR138CP38277 524 aa7.37□□□□□ -1.23
TOD6YBL054W APM2P38700 605 aa7.37□□□□□ -1.23
TOD6YBL054W ERC1P38767 581 aa7.37□□□□□ -1.23
TOD6YBL054W YJL206CP39529 758 aa7.37□□□□□ -1.23
TOD6YBL054W RPN3P40016 523 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W UBP7P40453 1071 aa7.37□□□□□ -1.23
TOD6YBL054W PHO86P46956 311 aa7.37□□□□□ -1.23
TOD6YBL054W PUS6P53294 404 aa7.37□□□□□ -1.23
TOD6YBL054W TEP1P53916 434 aa7.37□□□□□ -1.23
TOD6YBL054W ORC4P54791 529 aa7.37□□□□□ -1.23
TOD6YBL054W SND1Q04007 877 aa7.37□□□□□ -1.23
TOD6YBL054W GPI17Q04080 534 aa7.37□□□□□ -1.23
TOD6YBL054W SPC2Q04969 178 aa7.37□□□□□ -1.23
TOD6YBL054W VAM6Q07468 1049 aa7.37□□□□□ -1.23
TOD6YBL054W NOP12Q08208 459 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W BRR1Q99177 341 aaPredicted RBP7.37□□□□□ -1.23
TOD6YBL054W HEM1P09950 548 aaPredicted RBP7.37□□□□□ -1.23
TOD6YBL054W CAF20P12962 161 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W POL30P15873 258 aaKnown RBP7.37□□□□□ -1.23
TOD6YBL054W TEC1P18412 486 aa7.37□□□□□ -1.23
TOD6YBL054W PRP22P24384 1145 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms