RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 LZICQ8WZA0 190 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ARHGEF2Q92974 986 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 FBXL5Q9UKA1 691 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 Q4G0T1 1027 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ARHGAP22Q7Z5H3 698 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 TMC2Q8TDI7 906 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 JARID2Q92833 1246 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 CLMNQ96JQ2 1002 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MRPL11Q9Y3B7 192 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MUSKO15146 869 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 TBC1D12O60347 775 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 STAMBPO95630 424 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 SLC8A3P57103 927 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 OSBPL9Q96SU4 736 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 RRP7BPQ9NSQ0 103 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 DCAF16Q9NXF7 216 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 KCTD5Q9NXV2 234 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 PPP1R9AQ9ULJ8 1098 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 HSPA1LP34931 641 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ATP6V1E1P36543 226 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 UBE4AQ14139 1066 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 SMC1AQ14683 1233 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 SPATA1Q5VX52 437 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 GALNT6Q8NCL4 622 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 RBM17Q96I25 401 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 PPCSQ9HAB8 311 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ATG3Q9NT62 314 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ATP8B1O43520 1251 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 CAVIN2O95810 425 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MRPL12P52815 198 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MRPS35P82673 323 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ATF7IPQ6VMQ6 1270 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 SLC43A3Q8NBI5 491 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 CTAGE1Q96RT6 745 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 EPB41L4AQ9HCS5 686 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 KMT5AQ9NQR1 393 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 KIAA1468Q9P260 1216 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 GJA3Q9Y6H8 435 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 TARSL2A2RTX5 802 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 GOLGA8AA7E2F4 631 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 LUZP1Q86V48 1076 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ZMYND10O75800 440 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PDE1CQ14123 709 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CFAP36Q96G28 342 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 JPH2Q9BR39 696 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 TSPYL2Q9H2G4 693 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CNNM2Q9H8M5 875 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 GINM1Q9NU53 330 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CSE1LP55060 971 aaKnown RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 G3BP1Q13283 466 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 MPP3Q13368 585 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 SFMBT2Q5VUG0 894 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CCDC50Q8IVM0 306 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 BRSK1Q8TDC3 778 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 ANKRD7Q92527 254 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 ATP6V0A1Q93050 837 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 NACADO15069 1562 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 TUBA4AP68366 448 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 TMCO3Q6UWJ1 677 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 TADA2BQ86TJ2 420 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 TNIP2Q8NFZ5 429 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 FAXDC2Q96IV6 333 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PRKAB1Q9Y478 270 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 A0A1W2PRQ8 180 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 C2orf81A6NN90 581 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 NEMFO60524 1076 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 MFN1Q8IWA4 741 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CCDC113Q9H0I3 377 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 BATF3Q9NR55 127 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 GTF3C4Q9UKN8 822 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 NDC80O14777 642 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PAPOLAP51003 745 aaKnown RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 ITIH3Q06033 890 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PPP1R21Q6ZMI0 780 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 MAML1Q92585 1016 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 UTP14AQ9BVJ6 771 aaKnown RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 P4HA2O15460 535 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 AKR1B10O60218 316 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CCT6AP40227 531 aaKnown RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 UBXN2AP68543 259 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 KANK3Q6NY19 840 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 GCC1Q96CN9 775 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CHD5Q8TDI0 1954 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 BOLA2-SMG1P6H3BVE0 249 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 ORC4O43929 436 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 TMCC1O94876 653 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PYGLP06737 847 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CCNHP51946 323 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PDE4BQ07343 736 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 ARHGEF6Q15052 776 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CEP128Q6ZU80 1094 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PLPP6Q8IY26 295 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 CCDC112Q8NEF3 446 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PPP1R14BQ96C90 147 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 PRKRIP1Q9H875 184 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-209ENST00000639244 SCAPERQ9BY12 1400 aa4.87□□□□□ -1.63
SCN3A-209ENST00000639244 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-209ENST00000639244 GNL1P36915 607 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-209ENST00000639244 ZBTB10Q96DT7 871 aa4.86□□□□□ -1.63
SCN3A-209ENST00000639244 HELLSQ9NRZ9 838 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms