RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
SLC39A1-211ENST00000621013 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
SLC39A1-211ENST00000621013 CCDC57Q2TAC2 916 aa20.29■□□□□ 0.84
SLC39A1-211ENST00000621013 SYNE3Q6ZMZ3 975 aa20.29■□□□□ 0.84
SLC39A1-211ENST00000621013 ZNF215Q9UL58 517 aaPredicted RBP20.29■□□□□ 0.84
SLC39A1-211ENST00000621013 DCCP43146 1447 aa20.29■□□□□ 0.84
SLC39A1-211ENST00000621013 PSDA5PKW4 1024 aaPredicted RBP20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 CPLX1O14810 134 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 ADORA1P30542 326 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 GORABQ5T7V8 394 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 ZNF397Q8NF99 534 aaPredicted RBP20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 CABLES1Q8TDN4 633 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 TIGD1Q96MW7 591 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 XPO4Q9C0E2 1151 aaKnown RBP20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 TRMT1Q9NXH9 659 aaKnown RBP20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 KIF28PB7ZC32 967 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 NCAPHQ15003 741 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 RALYLQ86SE5 291 aaKnown RBP20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 FBXW7Q969H0 707 aa20.28■□□□□ 0.84
SLC39A1-211ENST00000621013 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 C4BP0C0L5 1744 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 IKBKBO14920 756 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 KIF20AO95235 890 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 ATF3P18847 181 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 IFNKQ9P0W0 207 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 MORC2Q9Y6X9 1032 aaPredicted RBP20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 TNS2Q63HR2 1409 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 ZNF213O14771 459 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 TUBB4AP04350 444 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 PFKFB1P16118 471 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 E4F1Q66K89 784 aaPredicted RBP20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 ARMCX5Q6P1M9 558 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 DDX17Q92841 729 aaKnown RBP20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 PLA2G12BQ9BX93 195 aa20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 PUS7LQ9H0K6 701 aaKnown RBP20.27■□□□□ 0.84
SLC39A1-211ENST00000621013 SMC2O95347 1197 aa20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 SLU7O95391 586 aaKnown RBP20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 ZAP70P43403 619 aa20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 SCARF1Q14162 830 aa20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 TMC6Q7Z403 805 aa20.26■□□□□ 0.83
SLC39A1-211ENST00000621013 GPAA1O43292 621 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 SFPQP23246 707 aaKnown RBP eCLIP20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 TCIRG1Q13488 830 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 L2HGDHQ9H9P8 463 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 TUBE1Q9UJT0 475 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 ZMYM6O95789 1325 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 NRDCO43847 1150 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 PPP1R13BQ96KQ4 1090 aa20.25■□□□□ 0.83
SLC39A1-211ENST00000621013 MROH7-TTC4A0A0A0MT08 1334 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 FAM237AA0A1B0GTK4 181 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 PPP6R2O75170 966 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 GABPB1Q06547 395 aaPredicted RBP20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 HPSEQ9Y251 543 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 ATRNO75882 1429 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 WDHD1O75717 1129 aaPredicted RBP20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 CSF1RP07333 972 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 GJB4Q9NTQ9 266 aa20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 ZHX1Q9UKY1 873 aaPredicted RBP20.24■□□□□ 0.83
SLC39A1-211ENST00000621013 SPATA31A3Q5VYP0 1347 aa20.23■□□□□ 0.83
SLC39A1-211ENST00000621013 CDKL5O76039 1030 aa20.23■□□□□ 0.83
SLC39A1-211ENST00000621013 PCCAP05165 728 aaPredicted RBP20.23■□□□□ 0.83
SLC39A1-211ENST00000621013 KMT5BQ4FZB7 885 aa20.23■□□□□ 0.83
SLC39A1-211ENST00000621013 ANGEL1Q9UNK9 670 aaKnown RBP20.23■□□□□ 0.83
SLC39A1-211ENST00000621013 MYH7P12883 1935 aa20.23■□□□□ 0.83
SLC39A1-211ENST00000621013 BIN1O00499 593 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 JMYQ8N9B5 988 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 NBPF3Q9H094 633 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 RIC1Q4ADV7 1423 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 FANCCQ00597 558 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 TRDNQ13061 729 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 ZNF512BQ96KM6 892 aaPredicted RBP20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 FAM53CQ9NYF3 392 aa20.22■□□□□ 0.83
SLC39A1-211ENST00000621013 SYKP43405 635 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 RAB11FIP4Q86YS3 637 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 ALG1Q9BT22 464 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 HSD3B7Q9H2F3 369 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 WDR17Q8IZU2 1322 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 SH2B2O14492 632 aaPredicted RBP20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 CCP110O43303 1012 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 MYO1BO43795 1136 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 ADD2P35612 726 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 IFIT5Q13325 482 aaKnown RBP20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 PTPAQ15257 358 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 CCDC93Q567U6 631 aa20.21■□□□□ 0.83
SLC39A1-211ENST00000621013 METAP2P50579 478 aaKnown RBP eCLIP20.2■□□□□ 0.82
SLC39A1-211ENST00000621013 ELF2Q15723 593 aa20.2■□□□□ 0.82
SLC39A1-211ENST00000621013 HSP90AB3PQ58FF7 597 aa20.2■□□□□ 0.82
SLC39A1-211ENST00000621013 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
SLC39A1-211ENST00000621013 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
SLC39A1-211ENST00000621013 KRT40Q6A162 431 aa20.2■□□□□ 0.82
SLC39A1-211ENST00000621013 CBFA2T2O43439 604 aa20.19■□□□□ 0.82
SLC39A1-211ENST00000621013 MARCKSP29966 332 aaPredicted RBP20.19■□□□□ 0.82
SLC39A1-211ENST00000621013 MCAMP43121 646 aa20.19■□□□□ 0.82
SLC39A1-211ENST00000621013 FBXO38Q6PIJ6 1188 aa20.19■□□□□ 0.82
SLC39A1-211ENST00000621013 CPLX2Q6PUV4 134 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms