RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 LAMA4Q16363 1823 aa17.02■□□□□ 0.31
CTCFL-219ENST00000608720 TNS3Q68CZ2 1445 aa17.02■□□□□ 0.31
CTCFL-219ENST00000608720 A0A087WWV3 80 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
CTCFL-219ENST00000608720 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 RALYLQ86SE5 291 aaKnown RBP17.01■□□□□ 0.31
CTCFL-219ENST00000608720 ZNF592Q92610 1267 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
CTCFL-219ENST00000608720 ZNF213O14771 459 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 ADORA1P30542 326 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 TPM4P67936 248 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
CTCFL-219ENST00000608720 CCAR2Q8N163 923 aaKnown RBP17.01■□□□□ 0.31
CTCFL-219ENST00000608720 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
CTCFL-219ENST00000608720 USP27XA6NNY8 438 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 SLC3A2P08195 630 aaKnown RBP17■□□□□ 0.31
CTCFL-219ENST00000608720 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
CTCFL-219ENST00000608720 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
CTCFL-219ENST00000608720 TERF2Q15554 542 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 CMA1P23946 247 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 ANTXR2P58335 489 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 NLRP12P59046 1061 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 ANO1Q5XXA6 986 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 PLA2G12BQ9BX93 195 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 FAM53CQ9NYF3 392 aa17■□□□□ 0.31
CTCFL-219ENST00000608720 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 MYH15Q9Y2K3 1946 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 DCCP43146 1447 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 ZNF202O95125 648 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 ZAP70P43403 619 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 CCDC150Q8NCX0 1101 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 FBXW7Q969H0 707 aa16.99■□□□□ 0.31
CTCFL-219ENST00000608720 PUS7LQ9H0K6 701 aaKnown RBP16.99■□□□□ 0.31
CTCFL-219ENST00000608720 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
CTCFL-219ENST00000608720 KIF23Q02241 960 aaPredicted RBP16.98■□□□□ 0.31
CTCFL-219ENST00000608720 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
CTCFL-219ENST00000608720 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■□□□□ 10.8
CTCFL-219ENST00000608720 GPAA1O43292 621 aa16.98■□□□□ 0.31
CTCFL-219ENST00000608720 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
CTCFL-219ENST00000608720 KIF18AQ8NI77 898 aa16.98■□□□□ 0.31
CTCFL-219ENST00000608720 CSF1RP07333 972 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 CDK11BP21127 795 aaKnown RBP16.97■□□□□ 0.31
CTCFL-219ENST00000608720 TRDNQ13061 729 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
CTCFL-219ENST00000608720 SCARF1Q14162 830 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 AXDND1Q5T1B0 1012 aaPredicted RBP16.97■□□□□ 0.31
CTCFL-219ENST00000608720 CADPS2Q86UW7 1296 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 KRT222Q8N1A0 295 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 TIGD1Q96MW7 591 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 TRMT1Q9NXH9 659 aaKnown RBP16.97■□□□□ 0.31
CTCFL-219ENST00000608720 NEDD4P46934 1319 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 WDR17Q8IZU2 1322 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 TJP1Q07157 1748 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 KCPQ6ZWJ8 1503 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 SMC2O95347 1197 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 SLC39A14Q15043 492 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 XPO4Q9C0E2 1151 aaKnown RBP16.97■□□□□ 0.31
CTCFL-219ENST00000608720 CALCOCO1Q9P1Z2 691 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
CTCFL-219ENST00000608720 KIF28PB7ZC32 967 aa16.96■□□□□ 0.31
CTCFL-219ENST00000608720 NRDCO43847 1150 aa16.96■□□□□ 0.31
CTCFL-219ENST00000608720 CDKL5O76039 1030 aa16.96■□□□□ 0.31
CTCFL-219ENST00000608720 KCNJ6P48051 423 aa16.96■□□□□ 0.31
CTCFL-219ENST00000608720 IRX5P78411 483 aaPredicted RBP16.96■□□□□ 0.31
CTCFL-219ENST00000608720 TOM1L2Q6ZVM7 507 aa16.96■□□□□ 0.31
CTCFL-219ENST00000608720 IFNKQ9P0W0 207 aa16.96■□□□□ 0.31
CTCFL-219ENST00000608720 UBAP1LF5GYI3 381 aa16.96■□□□□ 0.3
CTCFL-219ENST00000608720 IKBKBO14920 756 aa16.96■□□□□ 0.3
CTCFL-219ENST00000608720 IGSF3O75054 1194 aa16.96■□□□□ 0.3
CTCFL-219ENST00000608720 PFKFB1P16118 471 aa16.96■□□□□ 0.3
CTCFL-219ENST00000608720 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.3
CTCFL-219ENST00000608720 XIRP1Q702N8 1843 aaKnown RBP16.95■□□□□ 0.3
CTCFL-219ENST00000608720 ZMYM6O95789 1325 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 TUBB4AP04350 444 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 CPLX2Q6PUV4 134 aaKnown RBP16.95■□□□□ 0.3
CTCFL-219ENST00000608720 TMC6Q7Z403 805 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
CTCFL-219ENST00000608720 TSPYL1Q9H0U9 437 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
CTCFL-219ENST00000608720 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
CTCFL-219ENST00000608720 TULP2O00295 520 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 PPP6R2O75170 966 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 SFPQP23246 707 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTCFL-219ENST00000608720 NAA30Q147X3 362 aaPredicted RBP16.94■□□□□ 0.3
CTCFL-219ENST00000608720 NCAPHQ15003 741 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 TTF1Q15361 905 aaPredicted RBP16.94■□□□□ 0.3
CTCFL-219ENST00000608720 RAB11FIP4Q86YS3 637 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
CTCFL-219ENST00000608720 ALG1Q9BT22 464 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 GJB4Q9NTQ9 266 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
CTCFL-219ENST00000608720 BIN1O00499 593 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 ADD2P35612 726 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 HSP90AB3PQ58FF7 597 aa16.94■□□□□ 0.3
CTCFL-219ENST00000608720 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms