RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 PCDHB9Q9Y5E1 797 aa12.15□□□□□ -0.46
FARP1-235ENST00000601656 KIF20BQ96Q89 1820 aa12.15□□□□□ -0.46
FARP1-235ENST00000601656 CARMIL3Q8ND23 1372 aa12.15□□□□□ -0.46
FARP1-235ENST00000601656 SOS1Q07889 1333 aaPredicted RBP12.14□□□□□ -0.47
FARP1-235ENST00000601656 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 MTHFSP49914 203 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 PLEKHO1Q53GL0 409 aaPredicted RBP12.14□□□□□ -0.47
FARP1-235ENST00000601656 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
FARP1-235ENST00000601656 SEPT3Q9UH03 358 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
FARP1-235ENST00000601656 ANKRD31Q8N7Z5 1873 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
FARP1-235ENST00000601656 FGD1P98174 961 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 MORN1Q5T089 497 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 METTL16Q86W50 562 aaKnown RBP12.13□□□□□ -0.47
FARP1-235ENST00000601656 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 TESK2Q96S53 571 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 RBCK1Q9BYM8 510 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 TMA7Q9Y2S6 64 aaKnown RBP12.13□□□□□ -0.47
FARP1-235ENST00000601656 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
FARP1-235ENST00000601656 AOC2O75106 756 aa12.12□□□□□ -0.47
FARP1-235ENST00000601656 MAP2K2P36507 400 aa12.12□□□□□ -0.47
FARP1-235ENST00000601656 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
FARP1-235ENST00000601656 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
FARP1-235ENST00000601656 NT5DC4Q86YG4 428 aa12.12□□□□□ -0.47
FARP1-235ENST00000601656 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
FARP1-235ENST00000601656 ARMC5Q96C12 935 aa12.12□□□□□ -0.47
FARP1-235ENST00000601656 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
FARP1-235ENST00000601656 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 COL15A1P39059 1388 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
FARP1-235ENST00000601656 GTF2IP78347 998 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 FMR1Q06787 632 aaKnown RBP eCLIP12.11□□□□□ -0.47
FARP1-235ENST00000601656 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 CNKSR1Q969H4 720 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
FARP1-235ENST00000601656 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 MAP10Q9P2G4 905 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
FARP1-235ENST00000601656 TRPM7Q96QT4 1865 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 CA12O43570 354 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 RGS20O76081 388 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 SOX10P56693 466 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 EIF4A2Q14240 407 aaKnown RBP12.1□□□□□ -0.47
FARP1-235ENST00000601656 TMEM87AQ8NBN3 555 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 METTL5Q9NRN9 209 aaKnown RBP12.1□□□□□ -0.47
FARP1-235ENST00000601656 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
FARP1-235ENST00000601656 COL11A2P13942 1736 aaPredicted RBP12.09□□□□□ -0.47
FARP1-235ENST00000601656 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 C1orf141Q5JVX7 400 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 PRR5LQ6MZQ0 368 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
FARP1-235ENST00000601656 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 TMC7Q7Z402 723 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 ARMC2Q8NEN0 867 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 OCSTAMPQ9BR26 566 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
FARP1-235ENST00000601656 LTBP1Q14766 1721 aa12.08□□□□□ -0.47
FARP1-235ENST00000601656 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.47
FARP1-235ENST00000601656 TLDC2A0PJX2 215 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 SFI1A8K8P3 1242 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 ATP2B1P20020 1258 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 PTPRNQ16849 979 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 CST9Q5W186 159 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 USB1Q9BQ65 265 aaKnown RBP12.08□□□□□ -0.48
FARP1-235ENST00000601656 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
FARP1-235ENST00000601656 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 TLL2Q9Y6L7 1015 aa12.08□□□□□ -0.48
FARP1-235ENST00000601656 TREHO43280 583 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 NPR3P17342 541 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 WEE1P30291 646 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 TPCN2Q8NHX9 752 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 COL26A1Q96A83 441 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
FARP1-235ENST00000601656 TRAF5O00463 557 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 NPHP1O15259 732 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 FAM13AO94988 1023 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 SRGNP10124 158 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 CCDC93Q567U6 631 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 GPC2Q8N158 579 aa12.06□□□□□ -0.48
FARP1-235ENST00000601656 HELQQ8TDG4 1101 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms