RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 XP32Q5T750 250 aa7.56□□□□□ -1.2
ATXN3-246ENST00000557030 FAM20CQ8IXL6 584 aa7.56□□□□□ -1.2
ATXN3-246ENST00000557030 TRAK1Q9UPV9 953 aa7.56□□□□□ -1.2
ATXN3-246ENST00000557030 UTP4Q969X6 686 aaKnown RBP7.55□□□□□ -1.2
ATXN3-246ENST00000557030 USP26Q9BXU7 913 aa7.55□□□□□ -1.2
ATXN3-246ENST00000557030 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
ATXN3-246ENST00000557030 HIF3AQ9Y2N7 669 aa7.55□□□□□ -1.2
ATXN3-246ENST00000557030 PNMA6FA0A0J9YX94 578 aa7.54□□□□□ -1.2
ATXN3-246ENST00000557030 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
ATXN3-246ENST00000557030 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
ATXN3-246ENST00000557030 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
ATXN3-246ENST00000557030 MYO15BQ96JP2 1530 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 GADD45BO75293 160 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-246ENST00000557030 ECEL1O95672 775 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 CYP11A1P05108 521 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 CLEC10AQ8IUN9 316 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 BCO2Q9BYV7 579 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 CYP4F12Q9HCS2 524 aa7.53□□□□□ -1.2
ATXN3-246ENST00000557030 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.2
ATXN3-246ENST00000557030 GSC2O15499 205 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 BMP3P12645 472 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 MAOBP27338 520 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 POU4F3Q15319 338 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-246ENST00000557030 FDX2Q6P4F2 183 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-246ENST00000557030 TRIM42Q8IWZ5 723 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-246ENST00000557030 C3orf58Q8NDZ4 430 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 FBF1Q8TES7 1133 aa7.52□□□□□ -1.21
ATXN3-246ENST00000557030 GSX1Q9H4S2 264 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-246ENST00000557030 HMX2A2RU54 273 aa7.51□□□□□ -1.21
ATXN3-246ENST00000557030 XRCC5P13010 732 aaKnown RBP7.51□□□□□ -1.21
ATXN3-246ENST00000557030 SOX4Q06945 474 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-246ENST00000557030 NFIAQ12857 509 aa7.51□□□□□ -1.21
ATXN3-246ENST00000557030 LRP8Q14114 963 aa7.51□□□□□ -1.21
ATXN3-246ENST00000557030 RNF43Q68DV7 783 aa7.51□□□□□ -1.21
ATXN3-246ENST00000557030 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
ATXN3-246ENST00000557030 NLRP2Q9NX02 1062 aa7.51□□□□□ -1.21
ATXN3-246ENST00000557030 SART1O43290 800 aaKnown RBP7.5□□□□□ -1.21
ATXN3-246ENST00000557030 DRD2P14416 443 aa7.5□□□□□ -1.21
ATXN3-246ENST00000557030 SGO2Q562F6 1265 aa7.5□□□□□ -1.21
ATXN3-246ENST00000557030 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
ATXN3-246ENST00000557030 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
ATXN3-246ENST00000557030 C12orf50Q8NA57 414 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-246ENST00000557030 EZH1Q92800 747 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-246ENST00000557030 ZFYVE1Q9HBF4 777 aa7.5□□□□□ -1.21
ATXN3-246ENST00000557030 HYAL3O43820 417 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-246ENST00000557030 ADH5P11766 374 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 FCGRTP55899 365 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 AP3B2Q13367 1082 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 BEND4Q6ZU67 534 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 PDZD3Q86UT5 571 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 DDX54Q8TDD1 881 aaKnown RBP7.49□□□□□ -1.21
ATXN3-246ENST00000557030 ANKRD24Q8TF21 1146 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 OSBPL7Q9BZF2 842 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 WWC3Q9ULE0 1092 aa7.49□□□□□ -1.21
ATXN3-246ENST00000557030 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 MAP4P27816 1152 aaKnown RBP7.48□□□□□ -1.21
ATXN3-246ENST00000557030 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 DTHD1Q6ZMT9 781 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATXN3-246ENST00000557030 RB1CC1Q8TDY2 1594 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 WDR18Q9BV38 432 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 ZFP64Q9NPA5 681 aa7.48□□□□□ -1.21
ATXN3-246ENST00000557030 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
ATXN3-246ENST00000557030 MAPK8P45983 427 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 CD97P48960 835 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 HP1BP3Q5SSJ5 553 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-246ENST00000557030 ALG1LQ6GMV1 187 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 CORO1BQ9BR76 489 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 SRCIN1Q9C0H9 1055 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 CACNA2D2Q9NY47 1150 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
ATXN3-246ENST00000557030 GAS2O43903 313 aaKnown RBP7.46□□□□□ -1.22
ATXN3-246ENST00000557030 AOC2O75106 756 aa7.46□□□□□ -1.22
ATXN3-246ENST00000557030 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-246ENST00000557030 COL19A1Q14993 1142 aa7.46□□□□□ -1.22
ATXN3-246ENST00000557030 TMEM39AQ9NV64 488 aa7.46□□□□□ -1.22
ATXN3-246ENST00000557030 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.22
ATXN3-246ENST00000557030 ACTL7BQ9Y614 415 aa7.46□□□□□ -1.22
ATXN3-246ENST00000557030 GIPC1O14908 333 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 ZNF862O60290 1169 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 MED26O95402 600 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 GATA6Q92908 595 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-246ENST00000557030 NECAB3Q96P71 396 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-246ENST00000557030 KCNF1Q9H3M0 494 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
ATXN3-246ENST00000557030 ACSS3Q9H6R3 686 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 KRT82Q9NSB4 513 aa7.45□□□□□ -1.22
ATXN3-246ENST00000557030 SCO2A0A1W2PP80 73 aa7.44□□□□□ -1.22
ATXN3-246ENST00000557030 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-246ENST00000557030 TGFB1P01137 390 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms