RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MYH15Q9Y2K3 1946 aa28.53■■■□□ 2.16
TMEM260-207ENST00000555497 MBD4O95243 580 aa28.53■■■□□ 2.16
TMEM260-207ENST00000555497 SRP68Q9UHB9 627 aaKnown RBP28.53■■■□□ 2.16
TMEM260-207ENST00000555497 GUCY1B3Q02153 619 aa28.53■■■□□ 2.16
TMEM260-207ENST00000555497 ARMT1Q9H993 441 aa28.53■■■□□ 2.16
TMEM260-207ENST00000555497 INCENPQ9NQS7 918 aa28.53■■■□□ 2.16
TMEM260-207ENST00000555497 WDR19Q8NEZ3 1342 aa28.52■■■□□ 2.16
TMEM260-207ENST00000555497 CARMIL3Q8ND23 1372 aa28.52■■■□□ 2.16
TMEM260-207ENST00000555497 A0A1B0GUL6 1792 aa28.52■■■□□ 2.16
TMEM260-207ENST00000555497 IQSEC3Q9UPP2 1182 aaPredicted RBP28.52■■■□□ 2.16
TMEM260-207ENST00000555497 SCN7AQ01118 1682 aa28.52■■■□□ 2.16
TMEM260-207ENST00000555497 GOLGA8BA8MQT2 603 aa28.51■■■□□ 2.16
TMEM260-207ENST00000555497 ALX1Q15699 326 aa28.51■■■□□ 2.16
TMEM260-207ENST00000555497 ANKRD18AQ8IVF6 992 aa28.51■■■□□ 2.16
TMEM260-207ENST00000555497 USP21Q9UK80 565 aa28.51■■■□□ 2.16
TMEM260-207ENST00000555497 PATL2C9JE40 543 aaKnown RBP28.51■■■□□ 2.15
TMEM260-207ENST00000555497 IFNL3Q8IZI9 196 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 KIF3AQ9Y496 699 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 TACC3Q9Y6A5 838 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 CLCN1P35523 988 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 TRDNQ13061 729 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 AMIGO3Q86WK7 504 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 FTOQ9C0B1 505 aaKnown RBP eCLIP28.5■■■□□ 2.15
TMEM260-207ENST00000555497 NEDD4P46934 1319 aa28.5■■■□□ 2.15
TMEM260-207ENST00000555497 B4E1Z4 1266 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 PRKAB2O43741 272 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 RPS6KA4O75676 772 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 RC3H1Q5TC82 1133 aaKnown RBP28.49■■■□□ 2.15
TMEM260-207ENST00000555497 ILDR1Q86SU0 546 aaPredicted RBP28.49■■■□□ 2.15
TMEM260-207ENST00000555497 GSG1L2A8MUP6 293 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 GYG1P46976 350 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 SLC10A5Q5PT55 438 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 SENP2Q9HC62 589 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 NARFQ9UHQ1 456 aa28.49■■■□□ 2.15
TMEM260-207ENST00000555497 CEBPZQ03701 1054 aaKnown RBP28.48■■■□□ 2.15
TMEM260-207ENST00000555497 LCORLQ8N3X6 602 aa28.48■■■□□ 2.15
TMEM260-207ENST00000555497 CELF1Q92879 486 aaKnown RBP28.48■■■□□ 2.15
TMEM260-207ENST00000555497 BSDC1Q9NW68 430 aaPredicted RBP28.48■■■□□ 2.15
TMEM260-207ENST00000555497 ZNF804BA4D1E1 1349 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 THSD7AQ9UPZ6 1657 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 CHMP4CQ96CF2 233 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 DACT1Q9NYF0 836 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 MINPP1Q9UNW1 487 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 GOLGA6L4A6NEF3 574 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 CTDSPL2Q05D32 466 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 OTUD7BQ6GQQ9 843 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 C4AP0C0L4 1744 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 C4BP0C0L5 1744 aa28.47■■■□□ 2.15
TMEM260-207ENST00000555497 ZMYM6O95789 1325 aa28.46■■■□□ 2.15
TMEM260-207ENST00000555497 SH2B2O14492 632 aaPredicted RBP28.46■■■□□ 2.15
TMEM260-207ENST00000555497 CAMK4Q16566 473 aa28.46■■■□□ 2.15
TMEM260-207ENST00000555497 CFAP45Q9UL16 551 aa28.46■■■□□ 2.15
TMEM260-207ENST00000555497 ANGEL1Q9UNK9 670 aaKnown RBP28.46■■■□□ 2.15
TMEM260-207ENST00000555497 GNPATO15228 680 aa28.46■■■□□ 2.15
TMEM260-207ENST00000555497 GTF2E1P29083 439 aaPredicted RBP28.46■■■□□ 2.15
TMEM260-207ENST00000555497 NAPBQ9H115 298 aa28.46■■■□□ 2.15
TMEM260-207ENST00000555497 LRP2BPQ9P2M1 347 aa28.46■■■□□ 2.15
TMEM260-207ENST00000555497 COL1A1P02452 1464 aaPredicted RBP28.45■■■□□ 2.15
TMEM260-207ENST00000555497 CHD4Q14839 1912 aa28.45■■■□□ 2.15
TMEM260-207ENST00000555497 NHSQ6T4R5 1651 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 RGL2O15211 777 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 ADGRA1Q86SQ6 560 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 CCDC24Q8N4L8 307 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 MIGA1Q8NAN2 632 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 USP28Q96RU2 1077 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 NUP62CLQ9H1M0 184 aa28.45■■■□□ 2.14
TMEM260-207ENST00000555497 UBE4AQ14139 1066 aa28.44■■■□□ 2.14
TMEM260-207ENST00000555497 UVSSAQ2YD98 709 aa28.44■■■□□ 2.14
TMEM260-207ENST00000555497 IGDCC4Q8TDY8 1250 aa28.44■■■□□ 2.14
TMEM260-207ENST00000555497 GJB4Q9NTQ9 266 aa28.44■■■□□ 2.14
TMEM260-207ENST00000555497 ORC3Q9UBD5 711 aaPredicted RBP28.44■■■□□ 2.14
TMEM260-207ENST00000555497 CCNL1Q9UK58 526 aaPredicted RBP28.44■■■□□ 2.14
TMEM260-207ENST00000555497 RCOR1Q9UKL0 485 aa28.44■■■□□ 2.14
TMEM260-207ENST00000555497 DHX16O60231 1041 aaKnown RBP28.43■■■□□ 2.14
TMEM260-207ENST00000555497 NR1I2O75469 434 aa28.43■■■□□ 2.14
TMEM260-207ENST00000555497 KLHL34Q8N239 644 aa28.43■■■□□ 2.14
TMEM260-207ENST00000555497 PNPLA7Q6ZV29 1317 aa28.43■■■□□ 2.14
TMEM260-207ENST00000555497 SETDB2Q96T68 719 aa28.43■■■□□ 2.14
TMEM260-207ENST00000555497 SLC4A4Q9Y6R1 1079 aa28.43■■■□□ 2.14
TMEM260-207ENST00000555497 ZSCAN30Q86W11 494 aa28.42■■■□□ 2.14
TMEM260-207ENST00000555497 RXRAP19793 462 aa28.42■■■□□ 2.14
TMEM260-207ENST00000555497 BICD2Q8TD16 824 aa28.42■■■□□ 2.14
TMEM260-207ENST00000555497 COL24A1Q17RW2 1714 aa28.42■■■□□ 2.14
TMEM260-207ENST00000555497 CPLX1O14810 134 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 MAP3K11Q16584 847 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 HS1BP3Q53T59 392 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 ZSWIM5Q9P217 1185 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 ABCF2Q9UG63 623 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 ZPR1O75312 459 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 CYP7A1P22680 504 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 APOA5Q6Q788 366 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 NBPF5PQ86XG9 351 aaPredicted RBP28.41■■■□□ 2.14
TMEM260-207ENST00000555497 ARHGEF1Q92888 912 aaKnown RBP28.41■■■□□ 2.14
TMEM260-207ENST00000555497 C8orf76Q96K31 380 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 FAM84BQ96KN1 310 aaPredicted RBP28.41■■■□□ 2.14
TMEM260-207ENST00000555497 LY9Q9HBG7 655 aa28.41■■■□□ 2.14
TMEM260-207ENST00000555497 TMEM87BQ96K49 555 aa28.4■■■□□ 2.14
TMEM260-207ENST00000555497 TIAM2Q8IVF5 1701 aa28.39■■■□□ 2.14
TMEM260-207ENST00000555497 KDM4AO75164 1064 aa28.39■■■□□ 2.14
TMEM260-207ENST00000555497 KLRK1P26718 216 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms