RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PTCH1Q13635 1447 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 LRPPRCP42704 1394 aaKnown RBP7.63□□□□□ -1.19
CPSF7-220ENST00000541963 ABCC11Q96J66 1382 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 CDC14CA4D256 554 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 PHF20L1A8MW92 1017 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 EFSO43281 561 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 BNIP3LO60238 219 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 SORBS3O60504 671 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 SASH3O75995 380 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 RARAP10276 462 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
CPSF7-220ENST00000541963 CES1P23141 567 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 VAMP1P23763 118 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 SV2AQ7L0J3 742 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 KRT25Q7Z3Z0 450 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 CFHR5Q9BXR6 569 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 FOXD3Q9UJU5 478 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-220ENST00000541963 WWC3Q9ULE0 1092 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 XRN1Q8IZH2 1706 aaKnown RBP7.63□□□□□ -1.19
CPSF7-220ENST00000541963 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-220ENST00000541963 IFT172Q9UG01 1749 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 MYOM2P54296 1465 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 SPEM2Q0P670 501 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 ZNF837Q96EG3 531 aaPredicted RBP7.62□□□□□ -1.19
CPSF7-220ENST00000541963 ABHD17AQ96GS6 310 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 GSX2Q9BZM3 304 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 PPP4R2Q9NY27 417 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 TMEM63CQ9P1W3 806 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 KIAA1522Q9P206 1035 aaPredicted RBP7.62□□□□□ -1.19
CPSF7-220ENST00000541963 POGKQ9P215 609 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 VTI1BQ9UEU0 232 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 PRR12Q9ULL5 1215 aa7.62□□□□□ -1.19
CPSF7-220ENST00000541963 PRAG1Q86YV5 1406 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 ROBO2Q9HCK4 1378 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 ROBO1Q9Y6N7 1651 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 GIPC1O14908 333 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 PSAPP07602 524 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 GNA15P30679 374 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 DAB2P98082 770 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 WAPLQ7Z5K2 1190 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 CCDC74AQ96AQ1 378 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 CUEDC1Q9NWM3 386 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-220ENST00000541963 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-220ENST00000541963 NRXN1Q9ULB1 1477 aa7.61□□□□□ -1.19
CPSF7-220ENST00000541963 SETD1AO15047 1707 aaKnown RBP7.61□□□□□ -1.19
CPSF7-220ENST00000541963 YTHDC2Q9H6S0 1430 aaKnown RBP7.61□□□□□ -1.19
CPSF7-220ENST00000541963 LAMC1P11047 1609 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 PPFIA3O75145 1194 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 GADD45BO75293 160 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-220ENST00000541963 NFKB1P19838 968 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 FGFR3P22607 806 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 TARSP26639 723 aaKnown RBP7.6□□□□□ -1.19
CPSF7-220ENST00000541963 GRNP28799 593 aaKnown RBP7.6□□□□□ -1.19
CPSF7-220ENST00000541963 TSNAXIP1Q2TAA8 658 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 BRINP3Q76B58 766 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 VWA5B2Q8N398 1253 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 C1orf127Q8N9H9 656 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 BHMTQ93088 406 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 LRRC59Q96AG4 307 aaKnown RBP7.6□□□□□ -1.19
CPSF7-220ENST00000541963 TECPR2O15040 1411 aa7.6□□□□□ -1.19
CPSF7-220ENST00000541963 JCADQ9P266 1359 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 PHLPP1O60346 1717 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 THBS1P07996 1170 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 EDN3P14138 238 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 CD33P20138 364 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 EIF4BP23588 611 aaKnown RBP7.59□□□□□ -1.19
CPSF7-220ENST00000541963 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
CPSF7-220ENST00000541963 FAM182BQ5T319 152 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 SPACA7Q96KW9 195 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 STRN4Q9NRL3 753 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 NDFIP2Q9NV92 336 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 CNTN3Q9P232 1028 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 TRAK1Q9UPV9 953 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 MST1RQ04912 1400 aa7.59□□□□□ -1.19
CPSF7-220ENST00000541963 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 POLR3DP05423 398 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-220ENST00000541963 PLAURQ03405 335 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 HYAL2Q12891 473 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
CPSF7-220ENST00000541963 PCSK7Q16549 785 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 GALNT12Q8IXK2 581 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 OR13H1Q8NG92 308 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 FAM161BQ96MY7 647 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 PRAM1Q96QH2 718 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 SIN3AQ96ST3 1273 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 NSFL1CQ9UNZ2 370 aaKnown RBP7.58□□□□□ -1.2
CPSF7-220ENST00000541963 AK5Q9Y6K8 562 aa7.58□□□□□ -1.2
CPSF7-220ENST00000541963 SPATA31A6Q5VVP1 1343 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 C1orf167Q5SNV9 1468 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 EREGO14944 169 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 MMP20O60882 483 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 BMP4P12644 408 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 TCF3P15923 654 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 SAFB2Q14151 953 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF7-220ENST00000541963 MEX3CQ5U5Q3 659 aaKnown RBP7.57□□□□□ -1.2
CPSF7-220ENST00000541963 USPL1Q5W0Q7 1092 aa7.57□□□□□ -1.2
CPSF7-220ENST00000541963 NCAPG2Q86XI2 1143 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms