RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 PUS7LQ9H0K6 701 aaKnown RBP14.87□□□□□ -0.03
PTPN21-202ENST00000536337 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
PTPN21-202ENST00000536337 INCENPQ9NQS7 918 aa14.87□□□□□ -0.03
PTPN21-202ENST00000536337 KIAA1468Q9P260 1216 aa14.87□□□□□ -0.03
PTPN21-202ENST00000536337 ZNF532Q9HCE3 1301 aa14.87□□□□□ -0.03
PTPN21-202ENST00000536337 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
PTPN21-202ENST00000536337 CCDC196A0A1B0GTZ2 297 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 ZSCAN12O43309 604 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 CASQ1P31415 396 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 FANCCQ00597 558 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 ZNF827Q17R98 1081 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 STOX1Q6ZVD7 989 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 DZIP3Q86Y13 1208 aaKnown RBP14.86□□□□□ -0.03
PTPN21-202ENST00000536337 CCDC150Q8NCX0 1101 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 ELP1O95163 1332 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 G3V3G9 751 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 LZTFL1Q9NQ48 299 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 ASAP1Q9ULH1 1129 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 POLR2DO15514 142 aaKnown RBP14.86□□□□□ -0.03
PTPN21-202ENST00000536337 PFKFB1P16118 471 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 CCDC144BQ3MJ40 725 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 ADALQ6DHV7 355 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 BRAPQ7Z569 592 aa14.86□□□□□ -0.03
PTPN21-202ENST00000536337 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 PTPRUQ92729 1446 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 AP5Z1O43299 807 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 TXLNAP40222 546 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 IQCA1Q86XH1 822 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 CAGE1Q8TC20 777 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 CCDC12Q8WUD4 166 aaPredicted RBP14.85□□□□□ -0.03
PTPN21-202ENST00000536337 KCNF1Q9H3M0 494 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 NLRP5P59047 1200 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 ATP2B2Q01814 1243 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.85□□□□□ -0.03
PTPN21-202ENST00000536337 FBXO18Q8NFZ0 1043 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 KCNH3Q9ULD8 1083 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 TCIRG1Q13488 830 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 HSP90B2PQ58FF3 399 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 ZFP91Q96JP5 570 aaPredicted RBP14.85□□□□□ -0.03
PTPN21-202ENST00000536337 GREM2Q9H772 168 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 RCOR1Q9UKL0 485 aa14.85□□□□□ -0.03
PTPN21-202ENST00000536337 CCDC24Q8N4L8 307 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 TDRD7Q8NHU6 1098 aaKnown RBP14.84□□□□□ -0.03
PTPN21-202ENST00000536337 ZNF274Q96GC6 653 aaPredicted RBP14.84□□□□□ -0.03
PTPN21-202ENST00000536337 MAPK8IP1Q9UQF2 711 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 PREX1Q8TCU6 1659 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 DIS3L2Q8IYB7 885 aaKnown RBP14.84□□□□□ -0.03
PTPN21-202ENST00000536337 CTCFLQ8NI51 663 aaPredicted RBP14.84□□□□□ -0.03
PTPN21-202ENST00000536337 GOLPH3LQ9H4A5 285 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 CEP131Q9UPN4 1083 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 MYL5Q02045 173 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 PLIN2Q99541 437 aa14.84□□□□□ -0.03
PTPN21-202ENST00000536337 GTF2F1P35269 517 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTPN21-202ENST00000536337 ERCC6LQ2NKX8 1250 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 CAVIN4Q5BKX8 364 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 CATIPQ7Z7H3 387 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 CCDC47Q96A33 483 aaKnown RBP14.83□□□□□ -0.04
PTPN21-202ENST00000536337 NUP88Q99567 741 aaPredicted RBP14.83□□□□□ -0.04
PTPN21-202ENST00000536337 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
PTPN21-202ENST00000536337 NIP7Q9Y221 180 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTPN21-202ENST00000536337 DLC1Q96QB1 1528 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 BTBD18B2RXH4 712 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 VAT1LQ9HCJ6 419 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 PCDH11XQ9BZA7 1347 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 PCDH11YQ9BZA8 1340 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 PHKA1P46020 1223 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 KRT222Q8N1A0 295 aa14.83□□□□□ -0.04
PTPN21-202ENST00000536337 USP32Q8NFA0 1604 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 CLSTN1O94985 981 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 BTG4Q9NY30 223 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
PTPN21-202ENST00000536337 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 CARMIL3Q8ND23 1372 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 N4BP3O15049 544 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 FAM193AP78312 1265 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
PTPN21-202ENST00000536337 RNF41Q9H4P4 317 aaPredicted RBP14.82□□□□□ -0.04
PTPN21-202ENST00000536337 USP27XA6NNY8 438 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 ATP1A3P13637 1013 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 EIF5P55010 431 aaKnown RBP14.82□□□□□ -0.04
PTPN21-202ENST00000536337 ADKP55263 362 aaKnown RBP14.82□□□□□ -0.04
PTPN21-202ENST00000536337 ST3GAL1Q11201 340 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 ZNF174Q15697 407 aa14.82□□□□□ -0.04
PTPN21-202ENST00000536337 COBLO75128 1261 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 SSBP05455 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTPN21-202ENST00000536337 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 SCARF1Q14162 830 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 PDIA6Q15084 440 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 FANCLQ9NW38 375 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 TSPY2A6NKD2 308 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 NBPF26B4DH59 902 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 ATL3Q6DD88 541 aa14.81□□□□□ -0.04
PTPN21-202ENST00000536337 NBPF10Q6P3W6 841 aaKnown RBP14.81□□□□□ -0.04
PTPN21-202ENST00000536337 NBPF15Q8N660 670 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms