RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 TCRBV5S4A2TA0A5A2 114 aa8.79□□□□□ -1
CASP4-204ENST00000524843 VPS37CA5D8V6 355 aaPredicted RBP8.79□□□□□ -1
CASP4-204ENST00000524843 ZNF213O14771 459 aa8.79□□□□□ -1
CASP4-204ENST00000524843 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
CASP4-204ENST00000524843 LETM1O95202 739 aaPredicted RBP8.79□□□□□ -1
CASP4-204ENST00000524843 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
CASP4-204ENST00000524843 CAVIN4Q5BKX8 364 aa8.79□□□□□ -1
CASP4-204ENST00000524843 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
CASP4-204ENST00000524843 ATL3Q6DD88 541 aa8.79□□□□□ -1
CASP4-204ENST00000524843 NAA16Q6N069 864 aaPredicted RBP8.79□□□□□ -1
CASP4-204ENST00000524843 CAVIN1Q6NZI2 390 aaKnown RBP8.79□□□□□ -1
CASP4-204ENST00000524843 MB21D2Q8IYB1 491 aaPredicted RBP8.79□□□□□ -1
CASP4-204ENST00000524843 BRF1Q92994 677 aa8.79□□□□□ -1
CASP4-204ENST00000524843 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
CASP4-204ENST00000524843 NACAP1Q9BZK3 213 aa8.79□□□□□ -1
CASP4-204ENST00000524843 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
CASP4-204ENST00000524843 ZSCAN16Q9H4T2 348 aaPredicted RBP8.79□□□□□ -1
CASP4-204ENST00000524843 CNNM2Q9H8M5 875 aa8.79□□□□□ -1
CASP4-204ENST00000524843 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
CASP4-204ENST00000524843 BCL2L12Q9HB09 334 aa8.79□□□□□ -1
CASP4-204ENST00000524843 PIH1D3Q9NQM4 214 aaKnown RBP8.79□□□□□ -1
CASP4-204ENST00000524843 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
CASP4-204ENST00000524843 TCHHQ07283 1943 aa8.79□□□□□ -1
CASP4-204ENST00000524843 CACNA1SQ13698 1873 aa8.79□□□□□ -1
CASP4-204ENST00000524843 SALL1Q9NSC2 1324 aa8.79□□□□□ -1
CASP4-204ENST00000524843 BRWD3Q6RI45 1802 aa8.78□□□□□ -1
CASP4-204ENST00000524843 FOXP2O15409 715 aa8.78□□□□□ -1
CASP4-204ENST00000524843 FGAP02671 866 aa8.78□□□□□ -1
CASP4-204ENST00000524843 HSPA1LP34931 641 aa8.78□□□□□ -1
CASP4-204ENST00000524843 RCAN1P53805 252 aa8.78□□□□□ -1
CASP4-204ENST00000524843 ZSCAN23Q3MJ62 389 aa8.78□□□□□ -1
CASP4-204ENST00000524843 TBC1D9BQ66K14 1250 aa8.78□□□□□ -1
CASP4-204ENST00000524843 PI16Q6UXB8 463 aa8.78□□□□□ -1
CASP4-204ENST00000524843 FAM196AQ6ZSG2 479 aa8.78□□□□□ -1
CASP4-204ENST00000524843 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
CASP4-204ENST00000524843 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
CASP4-204ENST00000524843 FAM184AQ8NB25 1140 aa8.78□□□□□ -1
CASP4-204ENST00000524843 ANP32BQ92688 251 aaKnown RBP8.78□□□□□ -1
CASP4-204ENST00000524843 TMEM87BQ96K49 555 aa8.78□□□□□ -1
CASP4-204ENST00000524843 SCAND2PQ9GZW5 306 aaPredicted RBP8.78□□□□□ -1
CASP4-204ENST00000524843 PUS7LQ9H0K6 701 aaKnown RBP8.78□□□□□ -1
CASP4-204ENST00000524843 TAF6LQ9Y6J9 622 aa8.78□□□□□ -1
CASP4-204ENST00000524843 FAM177BA6PVY3 158 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 CDKL5O76039 1030 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 PCP11498 1178 aaKnown RBP8.77□□□□□ -1.01
CASP4-204ENST00000524843 RFC4P35249 363 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 CCDC183Q5T5S1 534 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 CPLX2Q6PUV4 134 aaKnown RBP8.77□□□□□ -1.01
CASP4-204ENST00000524843 NECAB1Q8N987 351 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 NSUN7Q8NE18 718 aaKnown RBP8.77□□□□□ -1.01
CASP4-204ENST00000524843 GPT2Q8TD30 523 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 STRBPQ96SI9 672 aaKnown RBP8.77□□□□□ -1.01
CASP4-204ENST00000524843 NAPBQ9H115 298 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 RNF41Q9H4P4 317 aaPredicted RBP8.77□□□□□ -1.01
CASP4-204ENST00000524843 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 COL4A1P02462 1669 aa8.77□□□□□ -1.01
CASP4-204ENST00000524843 COL1A1P02452 1464 aaPredicted RBP8.77□□□□□ -1.01
CASP4-204ENST00000524843 PTPDC1A2A3K4 754 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 PATL2C9JE40 543 aaKnown RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 H3BQV1 296 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 PRC1O43663 620 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 MBD4O95243 580 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 CHGBP05060 677 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 RPS8P62241 208 aaKnown RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 SCRN1Q12765 414 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 SART3Q15020 963 aaKnown RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 GIMAP6Q6P9H5 292 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 LRSAM1Q6UWE0 723 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 TMC4Q7Z404 712 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 VPS37DQ86XT2 251 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 CERS3Q8IU89 383 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 MAGEB6Q8N7X4 407 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 CNBD1Q8NA66 436 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 HELBQ8NG08 1087 aaPredicted RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 TCEANC2Q96MN5 208 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 KRT23Q9C075 422 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 ANGEL1Q9UNK9 670 aaKnown RBP8.76□□□□□ -1.01
CASP4-204ENST00000524843 MINPP1Q9UNW1 487 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 NRXN2Q9P2S2 1712 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 DLEC1Q9Y238 1755 aa8.76□□□□□ -1.01
CASP4-204ENST00000524843 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 GOLGA8BA8MQT2 603 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 NPHP1O15259 732 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 XRCC6P12956 609 aaKnown RBP eCLIP8.75□□□□□ -1.01
CASP4-204ENST00000524843 PDIA3P30101 505 aaKnown RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 LIFRP42702 1097 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 ST5P78524 1137 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 APOBRQ0VD83 1088 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 CCDC173Q0VFZ6 552 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 GRAPQ13588 217 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 SPTY2D1Q68D10 685 aaPredicted RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 CDC37L1Q7L3B6 337 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 FBXO33Q7Z6M2 555 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms