RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	GIPC1	O14908	333 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	GADD45B	O75293	160 aa	Predicted RBP	5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	IGLV1-40	P01703	118 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	MAPK1	P28482	360 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	FAM20C	Q8IXL6	584 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	DBNDD2	Q9BQY9	259 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TMPRSS13	Q9BYE2	586 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	NIF3L1	Q9GZT8	377 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ZFP64	Q9NPA5	681 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	LATS2	Q9NRM7	1088 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	KCNK4	Q9NYG8	393 aa		5.69	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	LOC100289279	A0A1B0GTE1	492 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	GPR182	O15218	404 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	POLR3D	P05423	398 aa	Predicted RBP	5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ITGB7	P26010	798 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ATP2B2	Q01814	1243 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	PPP2R3A	Q06190	1150 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	RNF43	Q68DV7	783 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	INTS5	Q6P9B9	1019 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	NBPF11	Q86T75	865 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	UBL7	Q96S82	380 aa	Predicted RBP	5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	FAM83C	Q9BQN1	747 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ZNF576	Q9H609	170 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	NPHS2	Q9NP85	383 aa		5.68	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	DDX3Y	O15523	660 aa	Known RBP	5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TRPA1	O75762	1119 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	IGHA2	P01877	340 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	PLCB3	Q01970	1234 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	NFIA	Q12857	509 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ORC1	Q13415	861 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ALG1L	Q6GMV1	187 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ADAMTSL4	Q6UY14	1074 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TMC7	Q7Z402	723 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	C12orf50	Q8NA57	414 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	FRMD6	Q96NE9	622 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	KCNF1	Q9H3M0	494 aa		5.67	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TMEM238L	A0A1B0GVL6	79 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TREH	O43280	583 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TIAF1	O95411	115 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	BMP3	P12645	472 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	GRIA4	P48058	902 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	USP11	P51784	963 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	POU4F3	Q15319	338 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ENOX2	Q16206	610 aa	Known RBP	5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	PAOX	Q6QHF9	649 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ARMC10	Q8N2F6	343 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	METTL22	Q9BUU2	404 aa	Predicted RBP	5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	C7orf69	Q9H7B7	122 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	SAMM50	Q9Y512	469 aa		5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.66	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	RBM47	A0AV96	593 aa	Known RBP	5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	COBL	O75128	1261 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ITGAE	P38570	1179 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	DTHD1	Q6ZMT9	781 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	BEND4	Q6ZU67	534 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ZNF428	Q96B54	188 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ASB16	Q96NS5	453 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	ABCB6	Q9NP58	842 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	RAD18	Q9NS91	495 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	PPM1H	Q9ULR3	514 aa		5.65	□□□□□ -1.5
CALCOCO2-223	ENST00000514267	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	MAOB	P27338	520 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	MAP4	P27816	1152 aa	Known RBP	5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	PREP	P48147	710 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	CYP27A1	Q02318	531 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	SOX4	Q06945	474 aa	Predicted RBP	5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	MAP7	Q14244	749 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	GRM2	Q14416	872 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	COL19A1	Q14993	1142 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	USPL1	Q5W0Q7	1092 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	SCARA3	Q6AZY7	606 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	EMILIN2	Q9BXX0	1053 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	CEP44	Q9C0F1	390 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	NRSN2	Q9GZP1	204 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	KRT82	Q9NSB4	513 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	SPG7	Q9UQ90	795 aa		5.64	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	PNMA6F	A0A0J9YX94	578 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	METTL12	A8MUP2	240 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	SLFN14	P0C7P3	912 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	ADH5	P11766	374 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	RXRB	P28702	533 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	GSTT1	P30711	240 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	FMR1	Q06787	632 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	DSC3	Q14574	896 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	ZNF423	Q2M1K9	1284 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	XP32	Q5T750	250 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	TRIM42	Q8IWZ5	723 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	ATG3	Q9NT62	314 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	TMEM39A	Q9NV64	488 aa		5.63	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	FAM95C	A0A1B0GW59	222 aa		5.62	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	SPRED3	Q2MJR0	410 aa		5.62	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	ANKRD24	Q8TF21	1146 aa		5.62	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	EZH1	Q92800	747 aa	Predicted RBP	5.62	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	PCMTD2	Q9NV79	361 aa		5.62	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.61	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	CD97	P48960	835 aa		5.61	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	PDE3A	Q14432	1141 aa		5.61	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	ZDHHC13	Q8IUH4	622 aa		5.61	□□□□□ -1.51
CALCOCO2-223	ENST00000514267	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms