RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
CALCOCO2-223ENST00000514267 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
CALCOCO2-223ENST00000514267 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
CALCOCO2-223ENST00000514267 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
CALCOCO2-223ENST00000514267 FOXD1Q16676 465 aa14.67□□□□□ -0.06
CALCOCO2-223ENST00000514267 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
CALCOCO2-223ENST00000514267 ADRA2BP18089 450 aa13.88□□□□□ -0.19
CALCOCO2-223ENST00000514267 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO2-223ENST00000514267 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
CALCOCO2-223ENST00000514267 MSH5O43196 834 aa13.83□□□□□ -0.2
CALCOCO2-223ENST00000514267 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-223ENST00000514267 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
CALCOCO2-223ENST00000514267 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
CALCOCO2-223ENST00000514267 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
CALCOCO2-223ENST00000514267 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO2-223ENST00000514267 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
CALCOCO2-223ENST00000514267 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
CALCOCO2-223ENST00000514267 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
CALCOCO2-223ENST00000514267 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO2-223ENST00000514267 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
CALCOCO2-223ENST00000514267 KCNA4P22459 653 aa12.19□□□□□ -0.46
CALCOCO2-223ENST00000514267 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
CALCOCO2-223ENST00000514267 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
CALCOCO2-223ENST00000514267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.77□□□□□ -0.531e-10■■□□□ 13.5
CALCOCO2-223ENST00000514267 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
CALCOCO2-223ENST00000514267 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
CALCOCO2-223ENST00000514267 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-223ENST00000514267 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
CALCOCO2-223ENST00000514267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.53□□□□□ -0.56
CALCOCO2-223ENST00000514267 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
CALCOCO2-223ENST00000514267 APLP2Q06481 763 aa11.52□□□□□ -0.57
CALCOCO2-223ENST00000514267 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
CALCOCO2-223ENST00000514267 U3KPZ7 1027 aaPredicted RBP11.46□□□□□ -0.57
CALCOCO2-223ENST00000514267 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
CALCOCO2-223ENST00000514267 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO2-223ENST00000514267 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
CALCOCO2-223ENST00000514267 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
CALCOCO2-223ENST00000514267 CAPN15O75808 1086 aa11.22□□□□□ -0.61
CALCOCO2-223ENST00000514267 ZBTB22O15209 634 aa11.14□□□□□ -0.63
CALCOCO2-223ENST00000514267 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
CALCOCO2-223ENST00000514267 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
CALCOCO2-223ENST00000514267 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-223ENST00000514267 DSG3P32926 999 aa11.04□□□□□ -0.64
CALCOCO2-223ENST00000514267 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
CALCOCO2-223ENST00000514267 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
CALCOCO2-223ENST00000514267 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
CALCOCO2-223ENST00000514267 ABCB7O75027 752 aa10.89□□□□□ -0.67
CALCOCO2-223ENST00000514267 POLA2Q14181 598 aa10.87□□□□□ -0.67
CALCOCO2-223ENST00000514267 ATF5Q9Y2D1 282 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-223ENST00000514267 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
CALCOCO2-223ENST00000514267 FBLN2P98095 1184 aa10.71□□□□□ -0.69
CALCOCO2-223ENST00000514267 SPDYE2BA6NHP3 402 aa10.5□□□□□ -0.73
CALCOCO2-223ENST00000514267 SPDYE6P0CI01 402 aa10.5□□□□□ -0.73
CALCOCO2-223ENST00000514267 SPDYE2Q495Y8 402 aa10.5□□□□□ -0.73
CALCOCO2-223ENST00000514267 OSCARQ8IYS5 282 aa10.49□□□□□ -0.73
CALCOCO2-223ENST00000514267 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
CALCOCO2-223ENST00000514267 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
CALCOCO2-223ENST00000514267 ZNF692Q9BU19 519 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-223ENST00000514267 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
CALCOCO2-223ENST00000514267 REM2Q8IYK8 340 aaPredicted RBP10.28□□□□□ -0.76
CALCOCO2-223ENST00000514267 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO2-223ENST00000514267 SPDYE4A6NLX3 237 aa10.23□□□□□ -0.77
CALCOCO2-223ENST00000514267 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
CALCOCO2-223ENST00000514267 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
CALCOCO2-223ENST00000514267 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
CALCOCO2-223ENST00000514267 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
CALCOCO2-223ENST00000514267 POTEHQ6S545 545 aa10.09□□□□□ -0.79
CALCOCO2-223ENST00000514267 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
CALCOCO2-223ENST00000514267 PROM2Q8N271 834 aa10.04□□□□□ -0.8
CALCOCO2-223ENST00000514267 PRR29P0C7W0 189 aa10.03□□□□□ -0.8
CALCOCO2-223ENST00000514267 FXR2P51116 673 aaKnown RBP eCLIP10.03□□□□□ -0.8
CALCOCO2-223ENST00000514267 FKBP8Q14318 412 aa10□□□□□ -0.81
CALCOCO2-223ENST00000514267 PIP4P2Q8N4L2 257 aa10□□□□□ -0.81
CALCOCO2-223ENST00000514267 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-223ENST00000514267 FBXO3Q9UK99 471 aa9.91□□□□□ -0.82
CALCOCO2-223ENST00000514267 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
CALCOCO2-223ENST00000514267 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
CALCOCO2-223ENST00000514267 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
CALCOCO2-223ENST00000514267 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
CALCOCO2-223ENST00000514267 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
CALCOCO2-223ENST00000514267 HAX1O00165 279 aa9.75□□□□□ -0.85
CALCOCO2-223ENST00000514267 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
CALCOCO2-223ENST00000514267 MIER1Q8N108 512 aa9.73□□□□□ -0.85
CALCOCO2-223ENST00000514267 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
CALCOCO2-223ENST00000514267 C19orf67A6NJJ6 358 aa9.7□□□□□ -0.86
CALCOCO2-223ENST00000514267 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
CALCOCO2-223ENST00000514267 CLCN6P51797 869 aa9.69□□□□□ -0.86
CALCOCO2-223ENST00000514267 SP7Q8TDD2 431 aaPredicted RBP9.65□□□□□ -0.86
CALCOCO2-223ENST00000514267 CD44P16070 742 aaKnown RBP9.64□□□□□ -0.87
CALCOCO2-223ENST00000514267 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-223ENST00000514267 MNX1P50219 401 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-223ENST00000514267 ZNF579Q8NAF0 562 aaKnown RBP9.54□□□□□ -0.88
CALCOCO2-223ENST00000514267 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
CALCOCO2-223ENST00000514267 KLHL34Q8N239 644 aa9.53□□□□□ -0.88
CALCOCO2-223ENST00000514267 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
CALCOCO2-223ENST00000514267 EVX2Q03828 476 aa9.46□□□□□ -0.9
CALCOCO2-223ENST00000514267 NUBP1P53384 320 aa9.45□□□□□ -0.9
CALCOCO2-223ENST00000514267 GSE1Q14687 1217 aa9.45□□□□□ -0.9
CALCOCO2-223ENST00000514267 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
CALCOCO2-223ENST00000514267 GABBR2O75899 941 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms