RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ZNF771Q7L3S4 317 aaPredicted RBP28.41■■■□□ 2.14
DDX41-202ENST00000503078 CMA1P23946 247 aa28.4■■■□□ 2.14
DDX41-202ENST00000503078 AXDND1Q5T1B0 1012 aaPredicted RBP28.4■■■□□ 2.14
DDX41-202ENST00000503078 FAM53CQ9NYF3 392 aa28.4■■■□□ 2.14
DDX41-202ENST00000503078 CPLX1O14810 134 aa28.4■■■□□ 2.14
DDX41-202ENST00000503078 ZFYP08048 801 aaPredicted RBP28.4■■■□□ 2.14
DDX41-202ENST00000503078 WASHC4Q2M389 1173 aa28.4■■■□□ 2.14
DDX41-202ENST00000503078 CADPS2Q86UW7 1296 aa28.4■■■□□ 2.14
DDX41-202ENST00000503078 KIF28PB7ZC32 967 aa28.39■■■□□ 2.14
DDX41-202ENST00000503078 FGAP02671 866 aa28.39■■■□□ 2.14
DDX41-202ENST00000503078 TUBB4AP04350 444 aa28.39■■■□□ 2.14
DDX41-202ENST00000503078 PFKFB1P16118 471 aa28.39■■■□□ 2.14
DDX41-202ENST00000503078 PUS3Q9BZE2 481 aaKnown RBP28.39■■■□□ 2.14
DDX41-202ENST00000503078 NUP188Q5SRE5 1749 aa28.39■■■□□ 2.14
DDX41-202ENST00000503078 KIF23Q02241 960 aaPredicted RBP28.39■■■□□ 2.14
DDX41-202ENST00000503078 CEP126Q9P2H0 1117 aa28.39■■■□□ 2.14
DDX41-202ENST00000503078 CCDC158Q5M9N0 1113 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 PKD1L3Q7Z443 1732 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 CCDC191Q8NCU4 936 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 NCOA7Q8NI08 942 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 GJB4Q9NTQ9 266 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 IKBKBO14920 756 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 SLFN14P0C7P3 912 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 SYT10Q6XYQ8 523 aa28.38■■■□□ 2.13
DDX41-202ENST00000503078 ANTXR2P58335 489 aa28.37■■■□□ 2.13
DDX41-202ENST00000503078 TTC39AQ5SRH9 613 aa28.37■■■□□ 2.13
DDX41-202ENST00000503078 DDX60Q8IY21 1712 aaKnown RBP28.37■■■□□ 2.13
DDX41-202ENST00000503078 HSPA2P54652 639 aa28.37■■■□□ 2.13
DDX41-202ENST00000503078 COL18A1P39060 1754 aa28.37■■■□□ 2.13
DDX41-202ENST00000503078 FANCCQ00597 558 aa28.36■■■□□ 2.13
DDX41-202ENST00000503078 CCDC93Q567U6 631 aa28.36■■■□□ 2.13
DDX41-202ENST00000503078 RALYLQ86SE5 291 aaKnown RBP28.36■■■□□ 2.13
DDX41-202ENST00000503078 RGS22Q8NE09 1264 aa28.36■■■□□ 2.13
DDX41-202ENST00000503078 TIGD1Q96MW7 591 aa28.36■■■□□ 2.13
DDX41-202ENST00000503078 GORABQ5T7V8 394 aa28.36■■■□□ 2.13
DDX41-202ENST00000503078 RAB11FIP4Q86YS3 637 aa28.36■■■□□ 2.13
DDX41-202ENST00000503078 LMOD1P29536 600 aaPredicted RBP28.35■■■□□ 2.13
DDX41-202ENST00000503078 SLC39A14Q15043 492 aa28.35■■■□□ 2.13
DDX41-202ENST00000503078 MROH7-TTC4A0A0A0MT08 1334 aa28.35■■■□□ 2.13
DDX41-202ENST00000503078 WDR19Q8NEZ3 1342 aa28.35■■■□□ 2.13
DDX41-202ENST00000503078 WDHD1O75717 1129 aaPredicted RBP28.35■■■□□ 2.13
DDX41-202ENST00000503078 APPBP2Q92624 585 aa28.35■■■□□ 2.13
DDX41-202ENST00000503078 TNS3Q68CZ2 1445 aa28.34■■■□□ 2.13
DDX41-202ENST00000503078 TERF2Q15554 542 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 XAGE2Q96GT9 111 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 ZBTB3Q9H5J0 574 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 TUBE1Q9UJT0 475 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 AKAP2Q9Y2D5 859 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 ZNF213O14771 459 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 CCP110O43303 1012 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 ADORA1P30542 326 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 HSD3B7Q9H2F3 369 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 C4AP0C0L4 1744 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 C4BP0C0L5 1744 aa28.33■■■□□ 2.13
DDX41-202ENST00000503078 H2AFXP16104 143 aaPredicted RBP28.32■■■□□ 2.12
DDX41-202ENST00000503078 SYKP43405 635 aa28.32■■■□□ 2.12
DDX41-202ENST00000503078 ERCC6LQ2NKX8 1250 aa28.32■■■□□ 2.12
DDX41-202ENST00000503078 PUS7LQ9H0K6 701 aaKnown RBP28.32■■■□□ 2.12
DDX41-202ENST00000503078 NPHP1O15259 732 aa28.32■■■□□ 2.12
DDX41-202ENST00000503078 MARCKSP29966 332 aaPredicted RBP28.32■■■□□ 2.12
DDX41-202ENST00000503078 SYTL4Q96C24 671 aaPredicted RBP28.32■■■□□ 2.12
DDX41-202ENST00000503078 ZNF446Q9NWS9 450 aa28.32■■■□□ 2.12
DDX41-202ENST00000503078 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.32■■■□□ 2.126e-7■■■□□ 16
DDX41-202ENST00000503078 CPDO75976 1380 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 ATP1A3P13637 1013 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 CCDC57Q2TAC2 916 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 ISM2Q6H9L7 571 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 CABLES1Q8TDN4 633 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 A1BGP04217 495 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 HPSEQ9Y251 543 aa28.31■■■□□ 2.12
DDX41-202ENST00000503078 PARP4Q9UKK3 1724 aaKnown RBP28.31■■■□□ 2.12
DDX41-202ENST00000503078 HOMER1Q86YM7 354 aa28.3■■■□□ 2.12
DDX41-202ENST00000503078 CBFA2T2O43439 604 aa28.3■■■□□ 2.12
DDX41-202ENST00000503078 PPP6R2O75170 966 aa28.3■■■□□ 2.12
DDX41-202ENST00000503078 ETF1P62495 437 aaKnown RBP28.3■■■□□ 2.12
DDX41-202ENST00000503078 SCARF1Q14162 830 aa28.3■■■□□ 2.12
DDX41-202ENST00000503078 HSP90AB3PQ58FF7 597 aa28.3■■■□□ 2.12
DDX41-202ENST00000503078 FBXO3Q9UK99 471 aa28.3■■■□□ 2.12
DDX41-202ENST00000503078 PHLPP2Q6ZVD8 1323 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 ZAP70P43403 619 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 ZMYM6O95789 1325 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 SPATA31A3Q5VYP0 1347 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
DDX41-202ENST00000503078 GPAA1O43292 621 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 UBASH3AP57075 661 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 MYL5Q02045 173 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 JMYQ8N9B5 988 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 LRRN4CLQ8ND94 238 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 ALG1Q9BT22 464 aa28.29■■■□□ 2.12
DDX41-202ENST00000503078 ABCC12Q96J65 1359 aa28.28■■■□□ 2.12
DDX41-202ENST00000503078 CHRNA2Q15822 529 aa28.28■■■□□ 2.12
DDX41-202ENST00000503078 SHC4Q6S5L8 630 aa28.28■■■□□ 2.12
DDX41-202ENST00000503078 VPS37DQ86XT2 251 aa28.28■■■□□ 2.12
DDX41-202ENST00000503078 SERPINC1P01008 464 aa28.27■■■□□ 2.12
DDX41-202ENST00000503078 BMS1Q14692 1282 aaKnown RBP28.27■■■□□ 2.12
DDX41-202ENST00000503078 TAF3Q5VWG9 929 aa28.27■■■□□ 2.12
DDX41-202ENST00000503078 FAM237AA0A1B0GTK4 181 aa28.26■■■□□ 2.12
DDX41-202ENST00000503078 TRDNQ13061 729 aa28.26■■■□□ 2.12
DDX41-202ENST00000503078 DPF2Q92785 391 aa28.26■■■□□ 2.12
DDX41-202ENST00000503078 AIFM3Q96NN9 605 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms