RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
NEAT1-201ENST00000499732 KCNJ4P48050 445 aa17.08■□□□□ 0.33
NEAT1-201ENST00000499732 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.33
NEAT1-201ENST00000499732 NLRP3Q96P20 1036 aa17.08■□□□□ 0.33
NEAT1-201ENST00000499732 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.33
NEAT1-201ENST00000499732 COL4A1P02462 1669 aa17.08■□□□□ 0.32
NEAT1-201ENST00000499732 AP5Z1O43299 807 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 ATP2B3Q16720 1220 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 KIF3AQ9Y496 699 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 AKAP11Q9UKA4 1901 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 NPHP1O15259 732 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
NEAT1-201ENST00000499732 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
NEAT1-201ENST00000499732 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 CNBD1Q8NA66 436 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 KCNF1Q9H3M0 494 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
NEAT1-201ENST00000499732 DDX19AQ9NUU7 478 aaKnown RBP17.07■□□□□ 0.32
NEAT1-201ENST00000499732 GOLIM4O00461 696 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 SERPINB2P05120 415 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
NEAT1-201ENST00000499732 MPNDQ8N594 471 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
NEAT1-201ENST00000499732 A0A1B0GUL6 1792 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 MROH5Q6ZUA9 1318 aa17.06■□□□□ 0.32
NEAT1-201ENST00000499732 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
NEAT1-201ENST00000499732 PDE8BO95263 885 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 CHGBP05060 677 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 TYRO3Q06418 890 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
NEAT1-201ENST00000499732 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 MYH7P12883 1935 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
NEAT1-201ENST00000499732 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
NEAT1-201ENST00000499732 TICAM2Q86XR7 235 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 MPHOSPH8Q99549 860 aa17.05■□□□□ 0.32
NEAT1-201ENST00000499732 TAF1P21675 1872 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 POLRMTO00411 1230 aaKnown RBP17.04■□□□□ 0.32
NEAT1-201ENST00000499732 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
NEAT1-201ENST00000499732 DDR1Q08345 913 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 KRT32Q14532 448 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 C17orf53Q8N3J3 647 aaPredicted RBP17.04■□□□□ 0.32
NEAT1-201ENST00000499732 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
NEAT1-201ENST00000499732 CHD4Q14839 1912 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 LIG1P18858 919 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 ST5P78524 1137 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 SCARF1Q14162 830 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 TNMDQ9H2S6 317 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 PYCARDQ9ULZ3 195 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 GOLGB1Q14789 3259 aaKnown RBP17.03■□□□□ 0.32
NEAT1-201ENST00000499732 CAVIN2O95810 425 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 FGFR2P21802 821 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 TOB2Q14106 344 aaPredicted RBP17.03■□□□□ 0.32
NEAT1-201ENST00000499732 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 CLSTN2Q9H4D0 955 aa17.03■□□□□ 0.32
NEAT1-201ENST00000499732 GOLGA6L4A6NEF3 574 aa17.02■□□□□ 0.31
NEAT1-201ENST00000499732 TAF5LO75529 589 aa17.02■□□□□ 0.31
NEAT1-201ENST00000499732 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.31
NEAT1-201ENST00000499732 ANKRD18AQ8IVF6 992 aa17.02■□□□□ 0.31
NEAT1-201ENST00000499732 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.31
NEAT1-201ENST00000499732 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.31
NEAT1-201ENST00000499732 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
NEAT1-201ENST00000499732 C1QTNF8P60827 252 aa17.01■□□□□ 0.31
NEAT1-201ENST00000499732 MCMDC2Q4G0Z9 681 aa17.01■□□□□ 0.31
NEAT1-201ENST00000499732 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
NEAT1-201ENST00000499732 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
NEAT1-201ENST00000499732 LEO1Q8WVC0 666 aaPredicted RBP17.01■□□□□ 0.31
NEAT1-201ENST00000499732 LPIN2Q92539 896 aa17.01■□□□□ 0.31
NEAT1-201ENST00000499732 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
NEAT1-201ENST00000499732 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
NEAT1-201ENST00000499732 FERMT3Q86UX7 667 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 SPC24Q8NBT2 197 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 BSDC1Q9NW68 430 aaPredicted RBP17■□□□□ 0.31
NEAT1-201ENST00000499732 DACT1Q9NYF0 836 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 MYO5AQ9Y4I1 1855 aaKnown RBP17■□□□□ 0.31
NEAT1-201ENST00000499732 MMP10P09238 476 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 MCAMP43121 646 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 PLA2G4DQ86XP0 818 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 GTF3C6Q969F1 213 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 CBX8Q9HC52 389 aa17■□□□□ 0.31
NEAT1-201ENST00000499732 CTIFO43310 598 aaKnown RBP16.99■□□□□ 0.31
NEAT1-201ENST00000499732 ZAP70P43403 619 aa16.99■□□□□ 0.31
NEAT1-201ENST00000499732 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms