RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FBXW7Q969H0 707 aa7.87□□□□□ -1.15
VPS13B-205ENST00000493587 CCDC114Q96M63 670 aa7.87□□□□□ -1.15
VPS13B-205ENST00000493587 NAT10Q9H0A0 1025 aaKnown RBP7.87□□□□□ -1.15
VPS13B-205ENST00000493587 CCDC61Q9Y6R9 512 aa7.87□□□□□ -1.15
VPS13B-205ENST00000493587 N4BP1O75113 896 aaKnown RBP7.86□□□□□ -1.15
VPS13B-205ENST00000493587 FCHSD2O94868 740 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 CAVIN2O95810 425 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 KCNA6P17658 529 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 EIF2S2P20042 333 aaKnown RBP7.86□□□□□ -1.15
VPS13B-205ENST00000493587 PRPHP41219 470 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
VPS13B-205ENST00000493587 NME9Q86XW9 330 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 B4GALNT2Q8NHY0 566 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 APBB1O00213 710 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 ABCC4O15439 1325 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 DCCP43146 1447 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 PPP2R3AQ06190 1150 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 KCNB1Q14721 858 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 RRP12Q5JTH9 1297 aaKnown RBP7.86□□□□□ -1.15
VPS13B-205ENST00000493587 GPR161Q8N6U8 529 aaKnown RBP7.86□□□□□ -1.15
VPS13B-205ENST00000493587 PARD6BQ9BYG5 372 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 ZNF831Q5JPB2 1677 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 HEG1Q9ULI3 1381 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 NUCB1Q02818 461 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
VPS13B-205ENST00000493587 THEMIS2Q5TEJ8 643 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 PHACTR3Q96KR7 559 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 DNAJC25Q9H1X3 360 aa7.86□□□□□ -1.15
VPS13B-205ENST00000493587 ITGB4P16144 1822 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 TTC21BQ7Z4L5 1316 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 TBC1D25Q3MII6 688 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 PREPLQ4J6C6 727 aaPredicted RBP7.85□□□□□ -1.15
VPS13B-205ENST00000493587 TRIM42Q8IWZ5 723 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 BICD1Q96G01 975 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 FUT8Q9BYC5 575 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 COL16A1Q07092 1604 aaPredicted RBP7.85□□□□□ -1.15
VPS13B-205ENST00000493587 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 KIAA0232Q92628 1395 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 AFDNP55196 1824 aaKnown RBP7.85□□□□□ -1.15
VPS13B-205ENST00000493587 IGSF1Q8N6C5 1336 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 ICA1Q05084 483 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 LRRFIP1Q32MZ4 808 aaKnown RBP7.85□□□□□ -1.15
VPS13B-205ENST00000493587 LRRC23Q53EV4 343 aaPredicted RBP7.85□□□□□ -1.15
VPS13B-205ENST00000493587 HDGFL1Q5TGJ6 251 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 DRAXINQ8NBI3 349 aaPredicted RBP7.85□□□□□ -1.15
VPS13B-205ENST00000493587 L2HGDHQ9H9P8 463 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 SAMM50Q9Y512 469 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 ANKRD36CQ5JPF3 1778 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 SBNO1A3KN83 1393 aa7.85□□□□□ -1.15
VPS13B-205ENST00000493587 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 AKNAD1Q5T1N1 836 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 BCAS4Q8TDM0 211 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 TSPAN18Q96SJ8 248 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 SRCIN1Q9C0H9 1055 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 ACEP12821 1306 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 TTC21AQ8NDW8 1320 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 TADA3O75528 432 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 RPS6KA5O75582 802 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 PYGBP11216 843 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 SFPQP23246 707 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 MAGEA8P43361 318 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 CAPRIN2Q6IMN6 1127 aaKnown RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 TSGA10Q9BZW7 698 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 A1CFQ9NQ94 594 aaKnown RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 VPS37CA5D8V6 355 aaPredicted RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 GOLGA6L10A6NI86 522 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 CEBPZQ03701 1054 aaKnown RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 MSL3Q8N5Y2 521 aaKnown RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 DYDC1Q8WWB3 177 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 EZH1Q92800 747 aaPredicted RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 GOLGA1Q92805 767 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 ARHGEF1Q92888 912 aaKnown RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 LMCD1Q9NZU5 365 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 EID1Q9Y6B2 187 aa7.84□□□□□ -1.15
VPS13B-205ENST00000493587 NPHP4O75161 1426 aaPredicted RBP7.84□□□□□ -1.15
VPS13B-205ENST00000493587 CAPN15O75808 1086 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 CA8P35219 290 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 RAB27AP51159 221 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 ETF1P62495 437 aaKnown RBP7.83□□□□□ -1.16
VPS13B-205ENST00000493587 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-205ENST00000493587 FAM71BQ8TC56 605 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 PPP1R13BQ96KQ4 1090 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 IQCGQ9H095 443 aaKnown RBP7.83□□□□□ -1.16
VPS13B-205ENST00000493587 GBP3Q9H0R5 595 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 SNCBQ16143 134 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 SLC30A9Q6PML9 568 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 UBXN6Q9BZV1 441 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 LRRCC1Q9C099 1032 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 KLC4Q9NSK0 619 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 SPATA21Q7Z572 469 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 TAX1BP1Q86VP1 789 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 BICD2Q8TD16 824 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 LMBR1Q8WVP7 490 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 CLIC6Q96NY7 704 aa7.83□□□□□ -1.16
VPS13B-205ENST00000493587 UPF3BQ9BZI7 483 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms