RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 SMPD1P17405 629 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 IRS1P35568 1242 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 PTPN12Q05209 780 aaKnown RBP7.97□□□□□ -1.13
USP41-204ENST00000486536 IFFO2Q5TF58 517 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 PDE12Q6L8Q7 609 aaKnown RBP7.97□□□□□ -1.13
USP41-204ENST00000486536 HDGFL2Q7Z4V5 671 aaPredicted RBP7.97□□□□□ -1.13
USP41-204ENST00000486536 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 DHX38Q92620 1227 aaKnown RBP7.97□□□□□ -1.13
USP41-204ENST00000486536 SPATA32Q96LK8 384 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 GMLQ99445 158 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 ELP3Q9H9T3 547 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 INPP5FQ9Y2H2 1132 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 XRN1Q8IZH2 1706 aaKnown RBP7.97□□□□□ -1.13
USP41-204ENST00000486536 MYBBP1AQ9BQG0 1328 aaKnown RBP7.97□□□□□ -1.13
USP41-204ENST00000486536 GDF9O60383 454 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 PHACTR2O75167 634 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 CANXP27824 592 aaKnown RBP7.96□□□□□ -1.14
USP41-204ENST00000486536 GTF2F1P35269 517 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP41-204ENST00000486536 CTSOP43234 321 aaPredicted RBP7.96□□□□□ -1.14
USP41-204ENST00000486536 TAF1CQ15572 869 aaPredicted RBP7.96□□□□□ -1.14
USP41-204ENST00000486536 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
USP41-204ENST00000486536 LRRC69Q6ZNQ3 347 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 HS2ST1Q7LGA3 356 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 SNX29Q8TEQ0 813 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 ZIC5Q96T25 663 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 DNAJC2Q99543 621 aaKnown RBP7.96□□□□□ -1.14
USP41-204ENST00000486536 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.14
USP41-204ENST00000486536 TOR4AQ9NXH8 423 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 GGT7Q9UJ14 662 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 PCDHGB7Q9Y5F8 929 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 KCNMB2Q9Y691 235 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 NSD2O96028 1365 aa7.96□□□□□ -1.14
USP41-204ENST00000486536 NCOA3Q9Y6Q9 1424 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 NKTRP30414 1462 aaKnown RBP7.95□□□□□ -1.14
USP41-204ENST00000486536 ATP7BP35670 1465 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 DNAJA1P31689 397 aaKnown RBP7.95□□□□□ -1.14
USP41-204ENST00000486536 ARID5AQ03989 594 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 TRIP4Q15650 581 aaPredicted RBP7.95□□□□□ -1.14
USP41-204ENST00000486536 ARSJQ5FYB0 599 aaPredicted RBP7.95□□□□□ -1.14
USP41-204ENST00000486536 PRICKLE2Q7Z3G6 844 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 SPNS2Q8IVW8 549 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 HPS1Q92902 700 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 TMEM63CQ9P1W3 806 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 NWD1Q149M9 1564 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 CGNL1Q0VF96 1302 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 NSD3Q9BZ95 1437 aa7.95□□□□□ -1.14
USP41-204ENST00000486536 UPP2O95045 317 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
USP41-204ENST00000486536 ATP4AP20648 1035 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 WDR44Q5JSH3 913 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 CC2D1BQ5T0F9 858 aaKnown RBP7.94□□□□□ -1.14
USP41-204ENST00000486536 NLRP13Q86W25 1043 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 CUEDC1Q9NWM3 386 aaPredicted RBP7.94□□□□□ -1.14
USP41-204ENST00000486536 FAM8A1Q9UBU6 413 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 MYOM1P52179 1685 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 A0A1W2PP64 1363 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 BRD4O60885 1362 aaPredicted RBP7.94□□□□□ -1.14
USP41-204ENST00000486536 CPSF1Q10570 1443 aaKnown RBP7.94□□□□□ -1.14
USP41-204ENST00000486536 PPIP5K1Q6PFW1 1433 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 ADGRL3Q9HAR2 1447 aa7.94□□□□□ -1.14
USP41-204ENST00000486536 TNFRSF10AO00220 468 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 USP17L7P0C7H9 530 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 MSX1P28360 303 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 MEI1Q5TIA1 1274 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 NXPE4Q6UWF7 544 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 VPS37DQ86XT2 251 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 ARMC5Q96C12 935 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 LNPKQ9C0E8 428 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 V9GY48 417 aaPredicted RBP7.93□□□□□ -1.14
USP41-204ENST00000486536 PRR36Q9H6K5 1346 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 CD163L1Q9NR16 1453 aa7.93□□□□□ -1.14
USP41-204ENST00000486536 GADD45BO75293 160 aaPredicted RBP7.92□□□□□ -1.14
USP41-204ENST00000486536 ST13P50502 369 aaKnown RBP7.92□□□□□ -1.14
USP41-204ENST00000486536 LYSMD3Q7Z3D4 306 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 C1orf127Q8N9H9 656 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 BCO2Q9BYV7 579 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 SRCIN1Q9C0H9 1055 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 NPHS2Q9NP85 383 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 TIMMDC1Q9NPL8 285 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 CNTN3Q9P232 1028 aa7.92□□□□□ -1.14
USP41-204ENST00000486536 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.92□□□□□ -1.14
USP41-204ENST00000486536 A0A1W2PNR3 127 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 CAPN5O15484 640 aaPredicted RBP7.91□□□□□ -1.14
USP41-204ENST00000486536 XYLBO75191 536 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 BMP2P12643 396 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 EPB42P16452 691 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 RBL2Q08999 1139 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 GIMAP6Q6P9H5 292 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 RNF217Q8TC41 542 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 PMEPA1Q969W9 287 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 CHRDQ9H2X0 955 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 C19orf44Q9H6X5 657 aa7.91□□□□□ -1.14
USP41-204ENST00000486536 POLR3AO14802 1390 aaPredicted RBP7.91□□□□□ -1.14
USP41-204ENST00000486536 EDC4Q6P2E9 1401 aaKnown RBP7.91□□□□□ -1.14
USP41-204ENST00000486536 CDC42BPGQ6DT37 1551 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms