RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 HLA-DOAP06340 250 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 TBC1D8BQ0IIM8 1120 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 APOBRQ0VD83 1088 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 CUL4AQ13619 759 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ZSCAN26Q16670 478 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 MAP3K21Q5TCX8 1036 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 IGSF22Q8N9C0 903 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 WDR66Q8TBY9 1149 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 PARP2Q9UGN5 583 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 CC2D2AQ9P2K1 1620 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 A0A1W2PRG0 241 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 SH2D4BQ5SQS7 431 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 Q6ZUG5 572 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 CTNNBL1Q8WYA6 563 aaPredicted RBP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ZSWIM4Q9H7M6 989 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 NEBLO76041 1014 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 GUCY1B3Q02153 619 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ERCC6LQ2NKX8 1250 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 GRIPAP1Q4V328 841 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 TAOK1Q7L7X3 1001 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 PPP1R14CQ8TAE6 165 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 CNKSR2Q8WXI2 1034 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 ZNF274Q96GC6 653 aaPredicted RBP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 PAIP2Q9BPZ3 127 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 MAP3K2Q9Y2U5 619 aa6.92□□□□□ -1.3
PRPF4B-205ENST00000480058 B4DLN1 442 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 IKBKBO14920 756 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 RPS6KB1P23443 525 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 MRPL12P52815 198 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NLRP12P59046 1061 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 SEMA3FQ13275 785 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 SEPT6Q14141 434 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 SYCE1Q8N0S2 351 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 TRIM58Q8NG06 486 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 FAM71BQ8TC56 605 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 LZTS2Q9BRK4 669 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 TACO1Q9BSH4 297 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 UTP14AQ9BVJ6 771 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 EFCC1Q9HA90 598 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 GOLGA6BA6NDN3 693 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 BUB1BO60566 1050 aaPredicted RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CEP57Q86XR8 500 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NECAB1Q8N987 351 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 RETREG2Q8NC44 543 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 OR8K1Q8NGG5 319 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 GABPB2Q8TAK5 448 aaPredicted RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NOX5Q96PH1 765 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 IMPG2Q9BZV3 1241 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 MAGEF1Q9HAY2 307 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.91□□□□□ -1.33e-6■■■□□ 17.6
PRPF4B-205ENST00000480058 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NOS1P29475 1434 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CFAP221Q4G0U5 840 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CLEC17AQ6ZS10 378 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 KBTBD3Q8NAB2 608 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 VCX3BQ9H321 246 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 BCL2L12Q9HB09 334 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 STAP2Q9UGK3 403 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 ANGEL1Q9UNK9 670 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NFE2L3Q9Y4A8 694 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 KRT9P35527 623 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 MAGEA1P43355 309 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 PHLDB3Q6NSJ2 640 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 DTHD1Q6ZMT9 781 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 C8orf58Q8NAV2 365 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 BCCIPQ9P287 314 aaKnown RBP eCLIP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 FAM184BQ9ULE4 1060 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 PCF11O94913 1555 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 A0A087WUV0 522 aaPredicted RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 EVI5O60447 810 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 FLOT1O75955 427 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CDC25BP30305 580 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 PRPF4BQ13523 1007 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 SSH3Q8TE77 659 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 APPBP2Q92624 585 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 SUDS3Q9H7L9 328 aaPredicted RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CABP5Q9NP86 173 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 PAG1Q9NWQ8 432 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 EIF2AK4Q9P2K8 1649 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 ADGRL1O94910 1474 aa6.91□□□□□ -1.3
PRPF4B-205ENST00000480058 CETN3O15182 167 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 CMA1P23946 247 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 MAP2K2P36507 400 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 LGSNQ5TDP6 509 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 TRMT2AQ8IZ69 625 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 MYCBPQ99417 103 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 DSCC1Q9BVC3 393 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 MMRN2Q9H8L6 949 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 GUCA1BQ9UMX6 200 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 RNF40O75150 1001 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 U2AF2P26368 475 aaKnown RBP eCLIP6.9□□□□□ -1.32e-11■■■■■ 34.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms