RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ANKRD36CQ5JPF3 1778 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 KIF6Q6ZMV9 814 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 NYAP1Q6ZVC0 841 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.89■□□□□ 0.13
BRCA1-209ENST00000470026 MYH3P11055 1940 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 ZMYM6O95789 1325 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 CMA1P23946 247 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 ARID5BQ14865 1188 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 UBE3CQ15386 1083 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 ANO1Q5XXA6 986 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 PI16Q6UXB8 463 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 RALYLQ86SE5 291 aaKnown RBP15.88■□□□□ 0.13
BRCA1-209ENST00000470026 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 AOPEPQ8N6M6 819 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 IMPACTQ9P2X3 320 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
BRCA1-209ENST00000470026 LRP5O75197 1615 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 A0A087WWV3 80 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 GSDMDP57764 484 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 TAF7LQ5H9L4 462 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
BRCA1-209ENST00000470026 LRP6O75581 1613 aa15.87■□□□□ 0.13
BRCA1-209ENST00000470026 FAM237AA0A1B0GTK4 181 aa15.87■□□□□ 0.13
BRCA1-209ENST00000470026 CCDC69A6NI79 296 aa15.87■□□□□ 0.13
BRCA1-209ENST00000470026 POLR3DP05423 398 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-209ENST00000470026 TTF1Q15361 905 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-209ENST00000470026 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
BRCA1-209ENST00000470026 TIGD1Q96MW7 591 aa15.87■□□□□ 0.13
BRCA1-209ENST00000470026 ANGEL1Q9UNK9 670 aaKnown RBP15.87■□□□□ 0.13
BRCA1-209ENST00000470026 ARAP2Q8WZ64 1704 aa15.87■□□□□ 0.13
BRCA1-209ENST00000470026 SH2B2O14492 632 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-209ENST00000470026 CPLX1O14810 134 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 SKILP12757 684 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 NCBP1Q09161 790 aaKnown RBP15.86■□□□□ 0.13
BRCA1-209ENST00000470026 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 SF3A1Q15459 793 aaKnown RBP15.86■□□□□ 0.13
BRCA1-209ENST00000470026 TPD52L1Q16890 204 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-209ENST00000470026 DPCR1Q3MIW9 517 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 PDCL2Q8N4E4 241 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 ZNF202O95125 648 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 ITGA6P23229 1130 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 NLRP12P59046 1061 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 HSP90AB3PQ58FF7 597 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 METTL24Q5JXM2 366 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 ERCC4Q92889 916 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-209ENST00000470026 ECM29Q5VYK3 1845 aa15.86■□□□□ 0.13
BRCA1-209ENST00000470026 ITGB4P16144 1822 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 STARD3NLO95772 234 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-209ENST00000470026 CTSWP56202 376 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 NCAPHQ15003 741 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 ALX1Q15699 326 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 LDHAL6AQ6ZMR3 332 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 CYB5R4Q7L1T6 521 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 NKX2-3Q8TAU0 364 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 PIGBQ92521 554 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 GREM2Q9H772 168 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 PIH1D3Q9NQM4 214 aaKnown RBP15.85■□□□□ 0.13
BRCA1-209ENST00000470026 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 ASAP1Q9ULH1 1129 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 HPSEQ9Y251 543 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
BRCA1-209ENST00000470026 TCRBV5S4A2TA0A5A2 114 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 USP27XA6NNY8 438 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 PPP6R2O75170 966 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 SLC3A2P08195 630 aaKnown RBP15.85■□□□□ 0.13
BRCA1-209ENST00000470026 PFKFB1P16118 471 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 PPP4R3BQ5MIZ7 849 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
BRCA1-209ENST00000470026 CCDC85AQ96PX6 553 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-209ENST00000470026 ANKRD18BA2A2Z9 1011 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 WDHD1O75717 1129 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-209ENST00000470026 CDKL5O76039 1030 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 KCNJ6P48051 423 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 TRDNQ13061 729 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 PTPAQ15257 358 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 HLFQ16534 295 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 SGMS1Q86VZ5 419 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
BRCA1-209ENST00000470026 SYNE4Q8N205 404 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 CCDC112Q8NEF3 446 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 TMEM87BQ96K49 555 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 TUBE1Q9UJT0 475 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 MROH7-TTC4A0A0A0MT08 1334 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 DOCK2Q92608 1830 aa15.84■□□□□ 0.13
BRCA1-209ENST00000470026 IKBKBO14920 756 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 PDE8BO95263 885 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 DHX8Q14562 1220 aaKnown RBP15.83■□□□□ 0.13
BRCA1-209ENST00000470026 NTRK3Q16288 839 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 SLC9C2Q5TAH2 1124 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 APOA5Q6Q788 366 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 DENND2AQ9ULE3 1009 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 TIAM2Q8IVF5 1701 aa15.83■□□□□ 0.13
BRCA1-209ENST00000470026 NID2Q14112 1375 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms