RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CASQ1P31415 396 aa22.76■■□□□ 1.23
SDF4-205ENST00000465727 IPO4Q8TEX9 1081 aaKnown RBP22.76■■□□□ 1.23
SDF4-205ENST00000465727 CWC15Q9P013 229 aaKnown RBP22.76■■□□□ 1.23
SDF4-205ENST00000465727 RSRC2Q7L4I2 434 aaKnown RBP22.75■■□□□ 1.23
SDF4-205ENST00000465727 NEK11Q8NG66 645 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 AK7Q96M32 723 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 MRFAP1Q9Y605 127 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 SASH3O75995 380 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 TMEM139Q8IV31 216 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 ANKRD24Q8TF21 1146 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 SMARCE1Q969G3 411 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 PAG1Q9NWQ8 432 aa22.75■■□□□ 1.23
SDF4-205ENST00000465727 POLR3DP05423 398 aaPredicted RBP22.74■■□□□ 1.23
SDF4-205ENST00000465727 C14orf37Q86TY3 774 aa22.74■■□□□ 1.23
SDF4-205ENST00000465727 EXOC4Q96A65 974 aa22.74■■□□□ 1.23
SDF4-205ENST00000465727 MYD88Q99836 296 aa22.74■■□□□ 1.23
SDF4-205ENST00000465727 AFDNP55196 1824 aaKnown RBP22.74■■□□□ 1.23
SDF4-205ENST00000465727 SLIT3O75094 1523 aa22.74■■□□□ 1.23
SDF4-205ENST00000465727 STX10O60499 249 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 SYKP43405 635 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 PPP2R3AQ06190 1150 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 SLC39A14Q15043 492 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 JMYQ8N9B5 988 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 KRBA2Q6ZNG9 492 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 HPSEQ9Y251 543 aa22.73■■□□□ 1.23
SDF4-205ENST00000465727 FAM237AA0A1B0GTK4 181 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 PPP6R2O75170 966 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 OLFM4Q6UX06 510 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 DPF2Q92785 391 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 GPR108Q9NPR9 543 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 C5P01031 1676 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 CAMTA1Q9Y6Y1 1673 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
SDF4-205ENST00000465727 CCDC151A5D8V7 595 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 VGLL3A8MV65 326 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 ST5P78524 1137 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 KIF23Q02241 960 aaPredicted RBP22.72■■□□□ 1.23
SDF4-205ENST00000465727 ZSCAN26Q16670 478 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 GOLGA5Q8TBA6 731 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 GOLGA1Q92805 767 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 BAG1Q99933 345 aaPredicted RBP22.72■■□□□ 1.23
SDF4-205ENST00000465727 FUT8Q9BYC5 575 aa22.72■■□□□ 1.23
SDF4-205ENST00000465727 MROH7-TTC4A0A0A0MT08 1334 aa22.71■■□□□ 1.23
SDF4-205ENST00000465727 GNG11P61952 73 aa22.71■■□□□ 1.23
SDF4-205ENST00000465727 MAST3O60307 1309 aa22.7■■□□□ 1.23
SDF4-205ENST00000465727 GOLIM4O00461 696 aa22.7■■□□□ 1.23
SDF4-205ENST00000465727 TBX2Q13207 712 aaPredicted RBP22.7■■□□□ 1.23
SDF4-205ENST00000465727 BRD3Q15059 726 aa22.7■■□□□ 1.23
SDF4-205ENST00000465727 XAGE3Q8WTP9 111 aa22.7■■□□□ 1.23
SDF4-205ENST00000465727 LRRC59Q96AG4 307 aaKnown RBP22.7■■□□□ 1.23
SDF4-205ENST00000465727 OTUD7BQ6GQQ9 843 aa22.7■■□□□ 1.22
SDF4-205ENST00000465727 PARD6BQ9BYG5 372 aa22.7■■□□□ 1.22
SDF4-205ENST00000465727 PPFIA3O75145 1194 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 GNL2Q13823 731 aaKnown RBP22.69■■□□□ 1.22
SDF4-205ENST00000465727 ELOA2Q8IYF1 753 aaPredicted RBP22.69■■□□□ 1.22
SDF4-205ENST00000465727 MSL3Q8N5Y2 521 aaKnown RBP22.69■■□□□ 1.22
SDF4-205ENST00000465727 C19orf44Q9H6X5 657 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 CPLX1O14810 134 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 RNF113AO15541 343 aaKnown RBP22.69■■□□□ 1.22
SDF4-205ENST00000465727 WDHD1O75717 1129 aaPredicted RBP22.69■■□□□ 1.22
SDF4-205ENST00000465727 TXLNAP40222 546 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 TUBB4BP68371 445 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 ANKRD13DQ6ZTN6 518 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 COPS6Q7L5N1 327 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 CHST3Q7LGC8 479 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 IQUBQ8NA54 791 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 KIFC2Q96AC6 838 aa22.69■■□□□ 1.22
SDF4-205ENST00000465727 WDR19Q8NEZ3 1342 aa22.68■■□□□ 1.22
SDF4-205ENST00000465727 HNRNPLLQ8WVV9 542 aaKnown RBP22.68■■□□□ 1.22
SDF4-205ENST00000465727 WDR24Q96S15 920 aa22.68■■□□□ 1.22
SDF4-205ENST00000465727 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
SDF4-205ENST00000465727 RASSF4Q9H2L5 321 aa22.68■■□□□ 1.22
SDF4-205ENST00000465727 PHF8Q9UPP1 1060 aa22.68■■□□□ 1.22
SDF4-205ENST00000465727 GOLGA8BA8MQT2 603 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 KIF28PB7ZC32 967 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 POTEB2H3BUK9 544 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 MAP2K7O14733 419 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 IMMTQ16891 758 aaKnown RBP22.67■■□□□ 1.22
SDF4-205ENST00000465727 ZNF790Q6PG37 636 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 CCDC34Q96HJ3 373 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 ZCCHC17Q9NP64 241 aaKnown RBP22.67■■□□□ 1.22
SDF4-205ENST00000465727 FANCLQ9NW38 375 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 ADAM21Q9UKJ8 722 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 HPS5Q9UPZ3 1129 aa22.67■■□□□ 1.22
SDF4-205ENST00000465727 C4AP0C0L4 1744 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 C4BP0C0L5 1744 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 KLF18A0A0U1RQI7 1052 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 TMEM232C9JQI7 657 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 MYL6BP14649 208 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 ISM2Q6H9L7 571 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 UBE3BQ7Z3V4 1068 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 ARFGEF2Q9Y6D5 1785 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 TMEM94Q12767 1356 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 A0A0G2JLW4 131 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 LONRF2Q1L5Z9 754 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 RESP18Q5W5W9 173 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 SPECC1LQ69YQ0 1117 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 CCDC191Q8NCU4 936 aa22.66■■□□□ 1.22
SDF4-205ENST00000465727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.66■■□□□ 1.22
SDF4-205ENST00000465727 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms