RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SCARF1Q14162 830 aa19.39■□□□□ 0.69
LIMS2-208ENST00000410011 PTPN14Q15678 1187 aa19.39■□□□□ 0.69
LIMS2-208ENST00000410011 NBPF11Q86T75 865 aa19.39■□□□□ 0.69
LIMS2-208ENST00000410011 PKNOX2Q96KN3 472 aa19.39■□□□□ 0.69
LIMS2-208ENST00000410011 RIPOR2Q9Y4F9 1068 aa19.39■□□□□ 0.69
LIMS2-208ENST00000410011 ZNF202O95125 648 aa19.38■□□□□ 0.69
LIMS2-208ENST00000410011 HAND2P61296 217 aa19.38■□□□□ 0.69
LIMS2-208ENST00000410011 SLC39A14Q15043 492 aa19.38■□□□□ 0.69
LIMS2-208ENST00000410011 TTF1Q15361 905 aaPredicted RBP19.38■□□□□ 0.69
LIMS2-208ENST00000410011 ZRSR1Q15695 479 aaKnown RBP19.38■□□□□ 0.69
LIMS2-208ENST00000410011 PRDM4Q9UKN5 801 aa19.38■□□□□ 0.69
LIMS2-208ENST00000410011 COL5A2P05997 1499 aaPredicted RBP19.38■□□□□ 0.69
LIMS2-208ENST00000410011 FAM237AA0A1B0GTK4 181 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 POLR3DP05423 398 aaPredicted RBP19.37■□□□□ 0.69
LIMS2-208ENST00000410011 SLC3A2P08195 630 aaKnown RBP19.37■□□□□ 0.69
LIMS2-208ENST00000410011 CCAR2Q8N163 923 aaKnown RBP19.37■□□□□ 0.69
LIMS2-208ENST00000410011 STRCP1A6NGW2 1772 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 ZMYM6O95789 1325 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 IKBKBO14920 756 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 PPP6R2O75170 966 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 CDKL5O76039 1030 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 TUBB4AP04350 444 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 ADD2P35612 726 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 TPM4P67936 248 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 ARID5BQ14865 1188 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 UBE3CQ15386 1083 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 ATP2B3Q16720 1220 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 CGNQ9P2M7 1197 aaKnown RBP19.37■□□□□ 0.69
LIMS2-208ENST00000410011 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
LIMS2-208ENST00000410011 MYH7P12883 1935 aa19.37■□□□□ 0.69
LIMS2-208ENST00000410011 TRDNQ13061 729 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 OTUD7BQ6GQQ9 843 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 FILIP1Q7Z7B0 1213 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 CCDC150Q8NCX0 1101 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 PRDM11Q9NQV5 511 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 ZSCAN20P17040 1043 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-208ENST00000410011 DPCR1Q3MIW9 517 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 TAF7LQ5H9L4 462 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 KIF6Q6ZMV9 814 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 RIC1Q4ADV7 1423 aa19.36■□□□□ 0.69
LIMS2-208ENST00000410011 C4AP0C0L4 1744 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 C4BP0C0L5 1744 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 SHANK3Q9BYB0 1731 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 KIF28PB7ZC32 967 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 PPFIA3O75145 1194 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 JMYQ8N9B5 988 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 TMEM87BQ96K49 555 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 GTPBP4Q9BZE4 634 aaKnown RBP19.35■□□□□ 0.69
LIMS2-208ENST00000410011 TUBE1Q9UJT0 475 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 HPSEQ9Y251 543 aa19.35■□□□□ 0.69
LIMS2-208ENST00000410011 USP27XA6NNY8 438 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 MCAMP43121 646 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 DMTNQ08495 405 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 NCAPHQ15003 741 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 GIGYF2Q6Y7W6 1299 aaKnown RBP19.34■□□□□ 0.69
LIMS2-208ENST00000410011 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 NBPF3Q9H094 633 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 AKAP11Q9UKA4 1901 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 PSDA5PKW4 1024 aaPredicted RBP19.34■□□□□ 0.69
LIMS2-208ENST00000410011 MYO1BO43795 1136 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 PFKFB1P16118 471 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 ALX1Q15699 326 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
LIMS2-208ENST00000410011 ELOA2Q8IYF1 753 aaPredicted RBP19.34■□□□□ 0.69
LIMS2-208ENST00000410011 ARID3AQ99856 593 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.34■□□□□ 0.69
LIMS2-208ENST00000410011 OGFRQ9NZT2 677 aa19.34■□□□□ 0.69
LIMS2-208ENST00000410011 A0A087WWV3 80 aa19.33■□□□□ 0.69
LIMS2-208ENST00000410011 SH2B2O14492 632 aaPredicted RBP19.33■□□□□ 0.69
LIMS2-208ENST00000410011 HSP90AB3PQ58FF7 597 aa19.33■□□□□ 0.69
LIMS2-208ENST00000410011 VGLL2Q8N8G2 317 aa19.33■□□□□ 0.69
LIMS2-208ENST00000410011 TTLL11Q8NHH1 800 aa19.33■□□□□ 0.69
LIMS2-208ENST00000410011 KIF18AQ8NI77 898 aa19.33■□□□□ 0.69
LIMS2-208ENST00000410011 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.69
LIMS2-208ENST00000410011 MAP3K15Q6ZN16 1313 aa19.33■□□□□ 0.68
LIMS2-208ENST00000410011 CBX1P83916 185 aa19.33■□□□□ 0.68
LIMS2-208ENST00000410011 METTL24Q5JXM2 366 aa19.33■□□□□ 0.68
LIMS2-208ENST00000410011 U2AF2P26368 475 aaKnown RBP eCLIP19.32■□□□□ 0.68
LIMS2-208ENST00000410011 METAP2P50579 478 aaKnown RBP eCLIP19.32■□□□□ 0.68
LIMS2-208ENST00000410011 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
LIMS2-208ENST00000410011 SGMS1Q86VZ5 419 aa19.32■□□□□ 0.68
LIMS2-208ENST00000410011 XPO4Q9C0E2 1151 aaKnown RBP19.32■□□□□ 0.68
LIMS2-208ENST00000410011 TMOD3Q9NYL9 352 aa19.32■□□□□ 0.68
LIMS2-208ENST00000410011 WDHD1O75717 1129 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-208ENST00000410011 STARD3NLO95772 234 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 PTPAQ15257 358 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 ALG1Q9BT22 464 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 NRDCO43847 1150 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 ARID4AP29374 1257 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-208ENST00000410011 APOA5Q6Q788 366 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 ERO1AQ96HE7 468 aa19.31■□□□□ 0.68
LIMS2-208ENST00000410011 SOS2Q07890 1332 aaPredicted RBP19.31■□□□□ 0.68
LIMS2-208ENST00000410011 ANKRD18BA2A2Z9 1011 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 UQCRFS1P1P0C7P4 283 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 ITGA6P23229 1130 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 SYKP43405 635 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 PI16Q6UXB8 463 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 NLRP10Q86W26 655 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms