RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
ATXN3-203ENST00000393287 CCDC83Q8IWF9 413 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 TEKT1Q969V4 418 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 RBM8AQ9Y5S9 174 aaKnown RBP9.35□□□□□ -0.91
ATXN3-203ENST00000393287 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 CDHR2Q9BYE9 1310 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 SIGLEC1Q9BZZ2 1709 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 SLC5A4Q9NY91 659 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 IQSEC3Q9UPP2 1182 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-203ENST00000393287 PARP1P09874 1014 aaKnown RBP9.35□□□□□ -0.91
ATXN3-203ENST00000393287 ATL3Q6DD88 541 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 USP44Q9H0E7 712 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 PXDNQ92626 1479 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-203ENST00000393287 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
ATXN3-203ENST00000393287 GSE1Q14687 1217 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 SMARCC2Q8TAQ2 1214 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.91
ATXN3-203ENST00000393287 USP37Q86T82 979 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 NAP1L5Q96NT1 182 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-203ENST00000393287 FAM114A1Q8IWE2 563 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 NUP62CLQ9H1M0 184 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 FIBPO43427 364 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 MATR3P43243 847 aaKnown RBP eCLIP9.34□□□□□ -0.91
ATXN3-203ENST00000393287 SSH3Q8TE77 659 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 RPAP1Q9BWH6 1393 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-203ENST00000393287 GRIN3BO60391 1043 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 MRE11P49959 708 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 CEMIPQ8WUJ3 1361 aa9.34□□□□□ -0.91
ATXN3-203ENST00000393287 NFIXQ14938 502 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 GRAPQ13588 217 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-203ENST00000393287 MTFR1LQ9H019 292 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
ATXN3-203ENST00000393287 COPRSQ9NQ92 184 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 KLF18A0A0U1RQI7 1052 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 PRC1O43663 620 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 MBD4O95243 580 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 CAVIN2O95810 425 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 IGHDP01880 384 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 RLBP1P12271 317 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATXN3-203ENST00000393287 DCPSQ96C86 337 aaKnown RBP9.33□□□□□ -0.92
ATXN3-203ENST00000393287 ORC3Q9UBD5 711 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-203ENST00000393287 SWAP70Q9UH65 585 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 ZNF142P52746 1687 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-203ENST00000393287 RGL2O15211 777 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 KDM4AO75164 1064 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
ATXN3-203ENST00000393287 ZBED4O75132 1171 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
ATXN3-203ENST00000393287 BRDTQ58F21 947 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-203ENST00000393287 DHX32Q7L7V1 743 aaKnown RBP9.32□□□□□ -0.92
ATXN3-203ENST00000393287 GPS2Q13227 327 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 SUSD4Q5VX71 490 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 PPFIBP1Q86W92 1011 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 SNX21Q969T3 373 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
ATXN3-203ENST00000393287 STX8Q9UNK0 236 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 SLC26A6Q9BXS9 759 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 TAOK3Q9H2K8 898 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 POLR1AO95602 1720 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-203ENST00000393287 MEGF6O75095 1541 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 SPDYE3A6NKU9 549 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 H7C1W4 665 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 ZHX3Q9H4I2 956 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 ZNF804BA4D1E1 1349 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 NWD1Q149M9 1564 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 OTUD7BQ6GQQ9 843 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 ZNF397Q8NF99 534 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-203ENST00000393287 KRT2P35908 639 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 ITPK1Q13572 414 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 PCDHB15Q9Y5E8 787 aa9.32□□□□□ -0.92
ATXN3-203ENST00000393287 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 CETN1Q12798 172 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
ATXN3-203ENST00000393287 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 LINC00116Q8NCU8 138 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 LLPHQ9BRT6 129 aaKnown RBP9.31□□□□□ -0.92
ATXN3-203ENST00000393287 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 NAPAP54920 295 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 ANO10Q9NW15 660 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 KIF20BQ96Q89 1820 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 SSBP05455 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
ATXN3-203ENST00000393287 CHMLP26374 656 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 GJB2P29033 226 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 KCNG4Q8TDN1 519 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-203ENST00000393287 CSADQ9Y600 493 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
ATXN3-203ENST00000393287 CHRNDQ07001 517 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms