RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
LRRK1-201ENST00000388948 TIMM10P62072 90 aa16.82■□□□□ 0.28
LRRK1-201ENST00000388948 GSDMDP57764 484 aa16.82■□□□□ 0.28
LRRK1-201ENST00000388948 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 RAB3IL1Q8TBN0 382 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 CTAGE1Q96RT6 745 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 NAP1L4Q99733 375 aaKnown RBP16.81■□□□□ 0.28
LRRK1-201ENST00000388948 DDX39AO00148 427 aaKnown RBP16.81■□□□□ 0.28
LRRK1-201ENST00000388948 USH1GQ495M9 461 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 PPM1EQ8WY54 764 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 STRN3Q13033 797 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 FRMD4BQ9Y2L6 1034 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.81■□□□□ 0.28
LRRK1-201ENST00000388948 GOLGA1Q92805 767 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 ARMT1Q9H993 441 aa16.81■□□□□ 0.28
LRRK1-201ENST00000388948 IQCGQ9H095 443 aaKnown RBP16.8■□□□□ 0.28
LRRK1-201ENST00000388948 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 BBXQ8WY36 941 aaPredicted RBP16.8■□□□□ 0.28
LRRK1-201ENST00000388948 CERS3Q8IU89 383 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 DDX12PQ92771 950 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 UBASH3AP57075 661 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 DCAF17Q5H9S7 520 aaPredicted RBP16.8■□□□□ 0.28
LRRK1-201ENST00000388948 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 A0A1W2PRG0 241 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 WDR44Q5JSH3 913 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 GADL1Q6ZQY3 521 aa16.8■□□□□ 0.28
LRRK1-201ENST00000388948 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
LRRK1-201ENST00000388948 KRT5P13647 590 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 PTGS1P23219 599 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 CYLC1P35663 651 aaPredicted RBP16.79■□□□□ 0.28
LRRK1-201ENST00000388948 PRPHP41219 470 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 UBE2HP62256 183 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 GTF2IP78347 998 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 NUCB1Q02818 461 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
LRRK1-201ENST00000388948 USP25Q9UHP3 1055 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 DKC1O60832 514 aaKnown RBP eCLIP16.79■□□□□ 0.28
LRRK1-201ENST00000388948 DNM2P50570 870 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 MAATS1Q7Z4T9 603 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 CCDC171Q6TFL3 1326 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 EYA2O00167 538 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 TRPC3Q13507 836 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 UQCRHLA0A096LP55 91 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 UQCRHP07919 91 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 CCDC65Q8IXS2 484 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 SELENOOQ9BVL4 669 aa16.79■□□□□ 0.28
LRRK1-201ENST00000388948 MAK16Q9BXY0 300 aaKnown RBP16.79■□□□□ 0.28
LRRK1-201ENST00000388948 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 CEP63Q96MT8 703 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 TRIM37O94972 964 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 TERF1P54274 439 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 KIFC2Q96AC6 838 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 TTF2Q9UNY4 1162 aaKnown RBP16.78■□□□□ 0.28
LRRK1-201ENST00000388948 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
LRRK1-201ENST00000388948 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 SNX16P57768 344 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 MAEAQ7L5Y9 396 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 TBC1D22AQ8WUA7 517 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 SPAG1Q07617 926 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 BICDL2A1A5D9 508 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 BMS1Q14692 1282 aaKnown RBP16.78■□□□□ 0.28
LRRK1-201ENST00000388948 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
LRRK1-201ENST00000388948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
LRRK1-201ENST00000388948 STX10O60499 249 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.28
LRRK1-201ENST00000388948 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
LRRK1-201ENST00000388948 HAUS7Q99871 368 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 GAS8O95995 478 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.28
LRRK1-201ENST00000388948 TXNDC16Q9P2K2 825 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 ATP10AO60312 1499 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 CCDC175P0C221 793 aa16.77■□□□□ 0.28
LRRK1-201ENST00000388948 RPL13P26373 211 aaKnown RBP16.77■□□□□ 0.28
LRRK1-201ENST00000388948 XAGE2Q96GT9 111 aa16.77■□□□□ 0.27
LRRK1-201ENST00000388948 SH3BP5O60239 455 aa16.77■□□□□ 0.27
LRRK1-201ENST00000388948 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.27
LRRK1-201ENST00000388948 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.27
LRRK1-201ENST00000388948 MAPKAPK5Q8IW41 473 aa16.77■□□□□ 0.27
LRRK1-201ENST00000388948 TEKT1Q969V4 418 aa16.77■□□□□ 0.27
LRRK1-201ENST00000388948 B4E1Z4 1266 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 CFBP00751 764 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 HACE1Q8IYU2 909 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 NEK11Q8NG66 645 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 ARHGEF35A5YM69 484 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 CCDC63Q8NA47 563 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 PHACTR3Q96KR7 559 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 NBPF3Q9H094 633 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 DCAF15Q66K64 600 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
LRRK1-201ENST00000388948 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms