RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 SKIDA1Q1XH10 827 aa8.11□□□□□ -1.11
CCDC171-201ENST00000380701 FAM196AQ6ZSG2 479 aa8.11□□□□□ -1.11
CCDC171-201ENST00000380701 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
CCDC171-201ENST00000380701 NLRX1Q86UT6 975 aa8.11□□□□□ -1.11
CCDC171-201ENST00000380701 LLPHQ9BRT6 129 aaKnown RBP8.11□□□□□ -1.11
CCDC171-201ENST00000380701 AZI2Q9H6S1 392 aa8.11□□□□□ -1.11
CCDC171-201ENST00000380701 TACC1O75410 805 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 INTS4Q96HW7 963 aaKnown RBP8.1□□□□□ -1.11
CCDC171-201ENST00000380701 MPNDQ8N594 471 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 APPBP2Q92624 585 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 MAST1Q9Y2H9 1570 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 BLMP54132 1417 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-201ENST00000380701 DEXIO95424 95 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 CCDC175P0C221 793 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 IRX3P78415 501 aaPredicted RBP8.1□□□□□ -1.11
CCDC171-201ENST00000380701 SPECC1Q5M775 1068 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 TTC14Q96N46 770 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 CA8P35219 290 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 ZNF165P49910 485 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 MAGEB6Q8N7X4 407 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 SRRTQ9BXP5 876 aaKnown RBP8.1□□□□□ -1.11
CCDC171-201ENST00000380701 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 SEMA3EO15041 775 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 APBA3O96018 575 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 VIMP08670 466 aaKnown RBP8.1□□□□□ -1.11
CCDC171-201ENST00000380701 GNPTABQ3T906 1256 aa8.1□□□□□ -1.11
CCDC171-201ENST00000380701 MEIS3Q99687 375 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 IQCGQ9H095 443 aaKnown RBP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 FRMD4BQ9Y2L6 1034 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 KIAA0232Q92628 1395 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 NOP56O00567 594 aaKnown RBP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 STRN3Q13033 797 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 CEP112Q8N8E3 955 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 CTTNBP2Q8WZ74 1663 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 FAM83GA6ND36 823 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 SDSP20132 328 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 CCNA1P78396 465 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 GUCY1B3Q02153 619 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 TRIM14Q14142 442 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 ARPP21Q9UBL0 812 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 NR1I2O75469 434 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 MRPS9P82933 396 aaKnown RBP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 SV2BQ7L1I2 683 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 NAP1L3Q99457 506 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-201ENST00000380701 A0A1W2PP64 1363 aa8.09□□□□□ -1.11
CCDC171-201ENST00000380701 SPTLC2O15270 562 aa8.09□□□□□ -1.12
CCDC171-201ENST00000380701 SNX21Q969T3 373 aa8.09□□□□□ -1.12
CCDC171-201ENST00000380701 FNBP1Q96RU3 617 aa8.09□□□□□ -1.12
CCDC171-201ENST00000380701 SYCE3A1L190 88 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 RFX1P22670 979 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 ITGA6P23229 1130 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 P4HA1P13674 534 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 ABCD1P33897 745 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 TEKT1Q969V4 418 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 NSRP1Q9H0G5 558 aaKnown RBP8.08□□□□□ -1.12
CCDC171-201ENST00000380701 MTUS1Q9ULD2 1270 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 KRT86O43790 486 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 EPB41P11171 864 aaKnown RBP8.08□□□□□ -1.12
CCDC171-201ENST00000380701 HOXA7P31268 230 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-201ENST00000380701 CAMK4Q16566 473 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 NEK11Q8NG66 645 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 PPP1R14CQ8TAE6 165 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 MIS12Q9H081 205 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 NLRP1Q9C000 1473 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 VAMP4O75379 141 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCDC171-201ENST00000380701 KLHL40Q2TBA0 621 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 EXOC8Q8IYI6 725 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 RAB3IL1Q8TBN0 382 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 CGNQ9P2M7 1197 aaKnown RBP8.08□□□□□ -1.12
CCDC171-201ENST00000380701 ALDH3A1P30838 453 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 CROCCP2Q86T23 111 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 RGS22Q8NE09 1264 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 PLEKHG1Q9ULL1 1385 aa8.08□□□□□ -1.12
CCDC171-201ENST00000380701 RIMBP2O15034 1052 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 URI1O94763 535 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 CNGA1P29973 690 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 NMIQ13287 307 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 CNNM4Q6P4Q7 775 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 CDC37L1Q7L3B6 337 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 VSIG10Q8N0Z9 540 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 TSGA10Q9BZW7 698 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 PAXBP1Q9Y5B6 917 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 CALUO43852 315 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 GALNT17Q6IS24 598 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 Q6ZUG5 572 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 CABLES1Q8TDN4 633 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 STK10O94804 968 aaKnown RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 MBD4O95243 580 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 LIN9Q5TKA1 542 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 ZNF354CQ86Y25 554 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 SLC17A8Q8NDX2 589 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 JPH2Q9BR39 696 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms