RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 LIG1P18858 919 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 FSD2A1L4K1 749 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 LMOD1P29536 600 aaPredicted RBP14.49□□□□□ -0.09
PTCD1-201ENST00000292478 PLCD1P51178 756 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 MYL5Q02045 173 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 MIGA1Q8NAN2 632 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 PICALMQ13492 652 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 SPECC1LQ69YQ0 1117 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 CCDC155Q8N6L0 562 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 GOLGA1Q92805 767 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 RBM17Q96I25 401 aaKnown RBP14.48□□□□□ -0.09
PTCD1-201ENST00000292478 ZNF830Q96NB3 372 aaPredicted RBP14.48□□□□□ -0.09
PTCD1-201ENST00000292478 CEP170Q5SW79 1584 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 ITGA6P23229 1130 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 CNGA4Q8IV77 575 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 SSH2Q76I76 1423 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 CHST3Q7LGC8 479 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 ACTN2P35609 894 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 TM6SF1Q9BZW5 370 aa14.48□□□□□ -0.09
PTCD1-201ENST00000292478 GLT8D2Q9H1C3 349 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 PARP1P09874 1014 aaKnown RBP14.47□□□□□ -0.09
PTCD1-201ENST00000292478 HELBQ8NG08 1087 aaPredicted RBP14.47□□□□□ -0.09
PTCD1-201ENST00000292478 NEK11Q8NG66 645 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 CCDC42Q96M95 316 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 ABCC4O15439 1325 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 OPA1O60313 960 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 PLCD4Q9BRC7 762 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 TRIM14Q14142 442 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 XAGE2Q96GT9 111 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 ANGEL1Q9UNK9 670 aaKnown RBP14.47□□□□□ -0.09
PTCD1-201ENST00000292478 PKNOX2Q96KN3 472 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 MMRN2Q9H8L6 949 aa14.47□□□□□ -0.09
PTCD1-201ENST00000292478 HS2ST1Q7LGA3 356 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 TSGA10Q9BZW7 698 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 IFNKQ9P0W0 207 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 STK24Q9Y6E0 443 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 MCM7P33993 719 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 UBXN1Q04323 297 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 GCKRQ14397 625 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 DBNDD2Q9BQY9 259 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 PARP3Q9Y6F1 533 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 FAM13AO94988 1023 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 STAMBPO95630 424 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 ANO1Q5XXA6 986 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 CLSTN2Q9H4D0 955 aa14.46□□□□□ -0.09
PTCD1-201ENST00000292478 NSFL1CQ9UNZ2 370 aaKnown RBP14.46□□□□□ -0.09
PTCD1-201ENST00000292478 EIF4A1P60842 406 aaKnown RBP14.46□□□□□ -0.1
PTCD1-201ENST00000292478 TMEM2Q9UHN6 1383 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 CUTAO60888 179 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 TNNI2P48788 182 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 STMN4Q9H169 189 aaPredicted RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 SH2D4AQ9H788 454 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 KDM5DQ9BY66 1539 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 F8W031 263 aaPredicted RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 RPL13P26373 211 aaKnown RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 TUBB2AQ13885 445 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 LPIN2Q92539 896 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 TUBB2BQ9BVA1 445 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 PUF60Q9UHX1 559 aaKnown RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 SPATA31E1Q6ZUB1 1445 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 MROH5Q6ZUA9 1318 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 HSPA4P34932 840 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 OTUD7AQ8TE49 926 aaPredicted RBP14.45□□□□□ -0.1
PTCD1-201ENST00000292478 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 TIMM10P62072 90 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 ZSWIM4Q9H7M6 989 aa14.45□□□□□ -0.1
PTCD1-201ENST00000292478 HIBADHP31937 336 aaKnown RBP14.44□□□□□ -0.1
PTCD1-201ENST00000292478 ZNF445P59923 1031 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 TRAPPC3LQ5T215 181 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 SV2BQ7L1I2 683 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 FAM89AQ96GI7 184 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 DSCC1Q9BVC3 393 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 MAST3O60307 1309 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 UBAP1LF5GYI3 381 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 CCDC65Q8IXS2 484 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 IMPG2Q9BZV3 1241 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 PTGS1P23219 599 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 CCDC77Q9BR77 488 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 ATP5JP18859 108 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 LMAN1P49257 510 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 LGR6Q9HBX8 967 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 GTF2F1P35269 517 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTCD1-201ENST00000292478 C8orf37Q96NL8 207 aa14.44□□□□□ -0.1
PTCD1-201ENST00000292478 GPAA1O43292 621 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 IVLP07476 585 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 BTG4Q9NY30 223 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 ERVV-2B6SEH9 535 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 AKR1B15C9JRZ8 316 aaPredicted RBP14.43□□□□□ -0.1
PTCD1-201ENST00000292478 PHACTR2O75167 634 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 WDR66Q8TBY9 1149 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 B4E1Z4 1266 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 CHMP4BP1P59074 171 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 HSP90AA4PQ58FG1 418 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
PTCD1-201ENST00000292478 IKBKGQ9Y6K9 419 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms