RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 TXLNBQ8N3L3 684 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 GREM2Q9H772 168 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 ARGLU1Q9NWB6 273 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 FHOD1Q9Y613 1164 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 CCDC69A6NI79 296 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 PLSCR1O15162 318 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 TUBB4AP04350 444 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-201ENST00000285398 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-201ENST00000285398 ADCK5Q3MIX3 580 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-201ENST00000285398 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 L2HGDHQ9H9P8 463 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 TRMT1Q9NXH9 659 aaKnown RBP12.23□□□□□ -0.45
ERCC3-201ENST00000285398 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 RREB1Q92766 1687 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 SASH1O94885 1247 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 GSDMDP57764 484 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 ERFEQ4G0M1 354 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 RUFY2Q8WXA3 655 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 GTF3C6Q969F1 213 aa12.23□□□□□ -0.45
ERCC3-201ENST00000285398 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
ERCC3-201ENST00000285398 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-201ENST00000285398 NTSR2O95665 410 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-201ENST00000285398 CCZ1BP86790 482 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 CCZ1P86791 482 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-201ENST00000285398 ERCC6LQ2NKX8 1250 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 ZNF652Q9Y2D9 606 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 NPHP1O15259 732 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 DTNBO60941 627 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 NR1I2O75469 434 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 TNNT3P45378 269 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-201ENST00000285398 CLCN6P51797 869 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 PTH1RQ03431 593 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
ERCC3-201ENST00000285398 IQCB1Q15051 598 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 MUM1L1Q5H9M0 696 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-201ENST00000285398 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
ERCC3-201ENST00000285398 BECN2A8MW95 431 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 IRX3P78415 501 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-201ENST00000285398 GPS2Q13227 327 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 G3BP1Q13283 466 aaKnown RBP eCLIP12.21□□□□□ -0.45
ERCC3-201ENST00000285398 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.45
ERCC3-201ENST00000285398 SLC51AQ86UW1 340 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 NECAB1Q8N987 351 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 EFCC1Q9HA90 598 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 TLR7Q9NYK1 1049 aaKnown RBP12.21□□□□□ -0.45
ERCC3-201ENST00000285398 TTC41PQ6P2S7 1318 aa12.21□□□□□ -0.45
ERCC3-201ENST00000285398 CTAGE5O15320 804 aa12.21□□□□□ -0.46
ERCC3-201ENST00000285398 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.46
ERCC3-201ENST00000285398 NFIXQ14938 502 aa12.21□□□□□ -0.46
ERCC3-201ENST00000285398 TMCO3Q6UWJ1 677 aa12.21□□□□□ -0.46
ERCC3-201ENST00000285398 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.46
ERCC3-201ENST00000285398 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.46
ERCC3-201ENST00000285398 TRERF1Q96PN7 1200 aa12.21□□□□□ -0.46
ERCC3-201ENST00000285398 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.46
ERCC3-201ENST00000285398 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.46
ERCC3-201ENST00000285398 GLRX3O76003 335 aaKnown RBP12.2□□□□□ -0.46
ERCC3-201ENST00000285398 GYS1P13807 737 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 ITGA6P23229 1130 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 CTSWP56202 376 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 STX1AQ16623 288 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 FAM173BQ6P4H8 233 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 PLA2G4AP47712 749 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 TFCP2Q12800 502 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 NECTIN1Q15223 517 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 ARHGAP29Q52LW3 1261 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
ERCC3-201ENST00000285398 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
ERCC3-201ENST00000285398 SNAP23O00161 211 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 ATP8B1O43520 1251 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 DHX8Q14562 1220 aaKnown RBP12.19□□□□□ -0.46
ERCC3-201ENST00000285398 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
ERCC3-201ENST00000285398 EAF2Q96CJ1 260 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-201ENST00000285398 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 ABCC12Q96J65 1359 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 NRDCO43847 1150 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 ANKRD1Q15327 319 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 AACSQ86V21 672 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 IMPACTQ9P2X3 320 aa12.19□□□□□ -0.46
ERCC3-201ENST00000285398 ZRANB2O95218 330 aaKnown RBP eCLIP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms