RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CCDC144AA2RUR9 1427 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 PDLIM1O00151 329 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 PAPOLAP51003 745 aaKnown RBP8.82□□□□□ -1
GPNMB-201ENST00000258733 SPATS2Q86XZ4 545 aaKnown RBP8.82□□□□□ -1
GPNMB-201ENST00000258733 KIRREL3Q8IZU9 778 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 TMCO5AQ8N6Q1 288 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 BICD2Q8TD16 824 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 DHTKD1Q96HY7 919 aaPredicted RBP8.82□□□□□ -1
GPNMB-201ENST00000258733 C16orf45Q96MC5 204 aaPredicted RBP8.82□□□□□ -1
GPNMB-201ENST00000258733 MPHOSPH6Q99547 160 aaKnown RBP8.82□□□□□ -1
GPNMB-201ENST00000258733 GORASP1Q9BQQ3 440 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 TNMDQ9H2S6 317 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 HELLSQ9NRZ9 838 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 TUBGCP4Q9UGJ1 667 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 SSX2IPQ9Y2D8 614 aa8.82□□□□□ -1
GPNMB-201ENST00000258733 CEP170Q5SW79 1584 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 CNTLNQ9NXG0 1405 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 PABPN1LA6NDY0 278 aaKnown RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 SPTLC2O15270 562 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 NDUFB5O43674 189 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 KIF11P52732 1056 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 CSE1LP55060 971 aaKnown RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 ATP2B2Q01814 1243 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 ARHGEF6Q15052 776 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 DDB1Q16531 1140 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 GSDMAQ96QA5 445 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 CROTQ9UKG9 612 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 CFAP45Q9UL16 551 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 SYCE3A1L190 88 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 ITIH3Q06033 890 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 SMC1AQ14683 1233 aaKnown RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 CCSAPQ6IQ19 270 aaPredicted RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 TMCO3Q6UWJ1 677 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
GPNMB-201ENST00000258733 ALDH8A1Q9H2A2 487 aaPredicted RBP8.81□□□□□ -1
GPNMB-201ENST00000258733 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 GLI2P10070 1586 aa8.81□□□□□ -1
GPNMB-201ENST00000258733 DESP17661 470 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 ERCC5P28715 1186 aaPredicted RBP8.8□□□□□ -1
GPNMB-201ENST00000258733 NEK2P51955 445 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 DHX8Q14562 1220 aaKnown RBP8.8□□□□□ -1
GPNMB-201ENST00000258733 RABL6Q3YEC7 729 aaPredicted RBP8.8□□□□□ -1
GPNMB-201ENST00000258733 EMC10Q5UCC4 262 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 CAPRIN2Q6IMN6 1127 aaKnown RBP8.8□□□□□ -1
GPNMB-201ENST00000258733 AASDHPPTQ9NRN7 309 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 ARGLU1Q9NWB6 273 aaPredicted RBP8.8□□□□□ -1
GPNMB-201ENST00000258733 MAFFQ9ULX9 164 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 B3GALNT1O75752 331 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 ZNF131P52739 623 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 LRRC49Q8IUZ0 686 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 DTNBP1Q96EV8 351 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 TCHPQ9BT92 498 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 C2orf49Q9BVC5 232 aaPredicted RBP8.8□□□□□ -1
GPNMB-201ENST00000258733 ZNF304Q9HCX3 659 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 HECW1Q76N89 1606 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 PTPN23Q9H3S7 1636 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 MTUS2Q5JR59 1369 aa8.8□□□□□ -1
GPNMB-201ENST00000258733 RASSF7Q02833 373 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 FKBP15Q5T1M5 1219 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 KANK3Q6NY19 840 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 TLDC1Q6P9B6 456 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 POTEDQ86YR6 584 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 WDR75Q8IWA0 830 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 STK11IPQ8N1F8 1099 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 MIGA1Q8NAN2 632 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 TCOF1Q13428 1488 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 TBKBP1A7MCY6 615 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 KIF3BO15066 747 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 PLIN1O60240 522 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 PARP1P09874 1014 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 INPP5BP32019 993 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 ARPC4P59998 168 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 MAP3K9P80192 1104 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 CCDC152Q4G0S7 254 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 MEX3CQ5U5Q3 659 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 CCBE1Q6UXH8 406 aaPredicted RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 BARGINQ6ZT62 677 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
GPNMB-201ENST00000258733 PAPOLBQ9NRJ5 636 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 ZNHIT6Q9NWK9 470 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 MAPK8IP3Q9UPT6 1336 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 ADCY5O95622 1261 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 SCG2P13521 617 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 ZFXP17010 805 aaPredicted RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 PRKAR2BP31323 418 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 CUL3Q13618 768 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 THOC7Q6I9Y2 204 aaKnown RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 NAA16Q6N069 864 aaPredicted RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 TTLL7Q6ZT98 887 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 SCYL1Q96KG9 808 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 SYNCQ9H7C4 482 aa8.79□□□□□ -1
GPNMB-201ENST00000258733 TUBA8Q9NY65 449 aaPredicted RBP8.79□□□□□ -1
GPNMB-201ENST00000258733 SUPT6HQ7KZ85 1726 aaKnown RBP8.78□□□□□ -1
GPNMB-201ENST00000258733 EHBP1L1Q8N3D4 1523 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 LDHAP00338 332 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms