RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Shank3Q4ACU6 1730 aa11.49□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Kiaa0319Q5SZV5 1081 aa11.49□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Carmil3Q3UFQ8 1375 aa11.49□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Fer1l6E0CZ42 1862 aa11.49□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Sh3tc1G3X9F6 1346 aa11.49□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Ankrd63A2ARS0 390 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Ces1hD3Z298 562 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Tuft1O08970 390 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Cplx1P63040 134 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 LyarQ08288 388 aaKnown RBP11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Ehmt1Q5DW34 1296 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Zfp317Q8C0Q5 607 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Alx1Q8C8B0 326 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Hnrnpul1Q8VDM6 859 aaKnown RBP11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Dydc2Q9D3X8 139 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Dpf1Q9QX66 387 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Cyp26a1O55127 497 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 TbcaP48428 108 aaKnown RBP11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Sumf1Q8R0F3 372 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Plcd1Q8R3B1 756 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Pde3aQ9Z0X4 1141 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 A0A1W2P7S8 802 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Il15P48346 162 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Bach1P97302 739 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Il17raQ60943 864 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Cdc5lQ6A068 802 aaKnown RBP11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Olfml1Q8BSH2 233 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Tpcn2Q8BWC0 731 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Alg3Q8K2A8 438 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 SdsQ8VBT2 327 aa11.48□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Pim2Q62070 370 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Cyp3a59D3Z2W7 503 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Tmem59lQ7TNI2 337 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Zscan22Q8BGS5 496 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 CerkQ8K4Q7 531 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Fbxl16A2RT62 479 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Mctp1E9PV86 951 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 NfixP70257 488 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Znf692Q3U381 531 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Sh3bp5lQ99LH9 392 aa11.47□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Map3k15A2AQW0 1331 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 CoblQ5NBX1 1337 aaKnown RBP11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Pde6aP27664 859 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Dok7Q18PE0 504 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Otop3Q80UF9 577 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Acnat2Q8BGG9 420 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 TnmdQ9EP64 317 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Suclg2Q9Z2I8 433 aa11.46□□□□□ -0.57
Rnf41-202ENSMUST00000171342 Cacna1sQ02789 1880 aa11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 TrdnE9Q9K5 693 aa11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Gnat2P50149 354 aa11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Ccdc174Q3U155 467 aa11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Smarcc2Q6PDG5 1213 aa11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Rbm28Q8CGC6 750 aaKnown RBP11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 HdlbpQ8VDJ3 1268 aaKnown RBP11.46□□□□□ -0.58
Rnf41-202ENSMUST00000171342 AU015836B2RUM3 263 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Dnm1P39053 867 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Rhbdl3P58873 404 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Nup133Q8R0G9 1155 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 CpzQ8R4V4 654 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Chd1lQ9CXF7 900 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 WtapQ9ER69 396 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 PdcQ9QW08 244 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Cdc45Q9Z1X9 566 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Prss40A6H6T1 365 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Rgs9O54828 675 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Myl3P09542 204 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Pde11aP0C1Q2 933 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 HelbQ6NVF4 1074 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Larp6Q8BN59 492 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Stk38Q91VJ4 465 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 St5Q924W7 1134 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Zfyve9A2A8R0 1397 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Siah1aP61092 282 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Gm5592Q3V0A6 857 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Snx13Q6PHS6 957 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Atp1a3Q6PIC6 1013 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Ipo4Q8VI75 1082 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Rcan3Q9JKK0 239 aa11.45□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Atp8b3Q6UQ17 1335 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Gm20425E9Q035 978 aaKnown RBP11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 SrprbP47758 269 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Jdp2P97875 163 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Cnnm2Q3TWN3 875 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Rnf41Q8BH75 317 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Bola3Q8CEI1 110 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Uba5Q8VE47 403 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Cxcl11Q9JHH5 100 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 MpndQ3TV65 487 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Krt40Q6IFX3 439 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Phf14Q9D4H9 881 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Rai14Q9EP71 979 aaKnown RBP11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Pik3ap1Q9EQ32 811 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Med23Q80YQ2 1367 aa11.44□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Frmd7A2AD83 703 aa11.43□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Spg7Q3ULF4 781 aa11.43□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Cdkl5Q3UTQ8 938 aa11.43□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Usp28Q5I043 1051 aa11.43□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Atxn2lQ7TQH0 1049 aaKnown RBP11.43□□□□□ -0.58
Rnf41-202ENSMUST00000171342 Hook1Q8BIL5 728 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms