RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Nop58Q6DFW4 536 aaKnown RBP13.67□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Irs4Q9Z0Y7 1216 aa13.67□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 InsrrQ9WTL4 1300 aa13.67□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Dicer1Q8R418 1916 aa13.67□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Kmt2eQ3UG20 1868 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Mboat7Q8CHK3 473 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Crlf2Q8CII9 359 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Ccdc81Q9D5W4 654 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Borcs6Q9D6W8 360 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Speer4dL7N216 212 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Cyp2b10P12791 500 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Kif22Q3V300 660 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Wbp1lQ8BGW2 348 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Znf784Q8BI69 297 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Rfc4Q99J62 364 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Myh15E9Q264 1925 aa13.66□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Washc4Q3UMB9 1173 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Erc2Q6PH08 957 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Chmp3Q9CQ10 224 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 DcpsQ9DAR7 338 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 A0A1W2P7S8 802 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Pde8bE9Q4S1 865 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Pdlim7Q3TJD7 457 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Neurod2Q62414 383 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Nlrp9bQ66X22 1003 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Cdc5lQ6A068 802 aaKnown RBP13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Slc45a1Q8BIV7 751 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Plekha4Q8VC98 588 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Speer4f1Q9D5Q6 258 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Dnajb2Q9QYI5 324 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Letm1Q9Z2I0 738 aa13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Arfgef1G3X9K3 1846 aaKnown RBP13.65□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Gja8P28236 440 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Mmp20P57748 482 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Cnksr2Q80YA9 1032 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Ncoa5Q91W39 579 aaKnown RBP13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Chd5A2A8L1 1946 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Cacna1fQ9JIS7 1985 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Ankrd63A2ARS0 390 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Rfpl4bJ3QPR6 266 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Nf2P46662 596 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Atp8a2P98200 1148 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Tigd5Q499M4 642 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Mum1Q6DID5 682 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Vmn1r199Q8R280 367 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 ParnQ8VDG3 624 aa13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Rbm33Q9CXK9 1231 aaKnown RBP13.64□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 XdhQ00519 1335 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Aox4Q3TYQ9 1336 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Myh4Q5SX39 1939 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Adam7O35227 789 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Lins1Q3U1D0 764 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Ksr2Q3UVC0 959 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Lamc2Q61092 1191 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Cavin2Q63918 418 aaKnown RBP13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Rab3gap1Q80UJ7 981 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 CrbnQ8C7D2 445 aa13.63□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Clrn2B2RVW2 232 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 SqleP52019 572 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Psmc4P54775 418 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 ShbQ6PD21 503 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Tbc1d8bA3KGB4 1114 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Mmp10O55123 476 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Tnni2P13412 182 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Csf2raQ00941 388 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Fam83bQ0VBM2 1012 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Gprin1Q3UNH4 932 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Tll2Q9WVM6 1012 aa13.62□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Map10Q8BJS7 891 aa13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Zkscan8Q8BSL0 588 aa13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Slc16a10Q3U9N9 512 aa13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Rbm27Q5SFM8 1060 aaKnown RBP13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Prpf40bQ80W14 870 aa13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Ufl1Q8CCJ3 793 aaKnown RBP13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 RarsQ9D0I9 660 aaKnown RBP13.61□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Myh13B1AR69 1938 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Med23Q80YQ2 1367 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Prl3d3A0A0M6L0J6 224 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Aifm3Q3TY86 605 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Adora1Q60612 326 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 AsnsQ61024 561 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Kiaa0753Q6A000 959 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Snx17Q8BVL3 470 aa13.6□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Bace1P56818 501 aa13.59□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Slc7a3P70423 618 aa13.59□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Tmem179Q8BHH9 233 aa13.59□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Sbno2Q7TNB8 1349 aa13.59□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Gm4340L7N2C4 268 aa13.59□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 Tm4sf1Q64302 202 aa13.59□□□□□ -0.23
Ccdc60-202ENSMUST00000086483 NefhP19246 1090 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 NcanP55066 1268 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Itm2cQ91VK4 269 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Txnrd2Q9JLT4 524 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Lbhd1A0A087WPA0 259 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Btg4O70552 250 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Trap1aP19473 224 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Ccnd3P30282 292 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Arl14Q3SXC5 192 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Sept9Q80UG5 583 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 U2af1l4Q8BGJ9 220 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms