RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Cxcl11Q9JHH5 100 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Rcan3Q9JKK0 239 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ccdc88aQ5SNZ0 1873 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Map3k15A2AQW0 1331 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Adgra3Q7TT36 1310 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Dctn1O08788 1281 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 UncxO08934 530 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Lnx1O70263 728 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ccdc174Q3U155 467 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ifit1bl2Q3U687 466 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ubash3aQ3V3E1 624 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Pnma3Q8JZW8 466 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Akt1s1Q9D1F4 257 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 EappQ5BU09 281 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ltv1Q6NSQ7 470 aaKnown RBP9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Naa30Q8CES0 364 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ces1dQ8VCT4 565 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Eaf2Q91ZD6 262 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Chmp3Q9CQ10 224 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Plxnb2B2RXS4 1842 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Lipo1J3QME6 396 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Foxp1P58462 705 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Atp1b3P97370 278 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Zc3h12cQ5DTV4 884 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Gimap8Q75N62 688 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Bsdc1Q80Y55 427 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 MlphQ91V27 590 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Gja10Q9WUS4 505 aa9.35□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Spryd3E9Q9B3 442 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Stat5bP42232 786 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ranbp6Q8BIV3 1105 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Yeats4Q9CR11 227 aaKnown RBP9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ndufa8Q9DCJ5 172 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Col4a3bpQ9EQG9 624 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Osbpl5Q9ER64 874 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Foxo3Q9WVH4 672 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Krt85Q9Z2T6 507 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Snapc4Q8BP86 1333 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Fxr1Q61584 677 aaKnown RBP9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Zcrb1Q9CZ96 217 aaKnown RBP9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Rbm6S4R1W5 1118 aaKnown RBP9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Bnip3O55003 187 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Cnnm2Q3TWN3 875 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Usp48Q3V0C5 1052 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ufl1Q8CCJ3 793 aaKnown RBP9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Pms1Q8K119 917 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 IcoslgQ9JHJ8 322 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Mx2Q9WVP9 655 aa9.34□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ccdc173A0JLY1 547 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Krt24A1L317 512 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Stox1B2RQL2 990 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 AU015836B2RUM3 263 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Llgl2Q3TJ91 1027 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Nyap1Q6PFX7 833 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Olfm5Q8BU90 496 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Bola3Q8CEI1 110 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Kcnq3Q8K3F6 873 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 HmcesQ8R1M0 353 aaKnown RBP9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Myh8P13542 1937 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Il15P48346 162 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Rrp1P56183 494 aaKnown RBP9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Acap3Q6NXL5 833 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Tsen34Q8BMZ5 316 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Cep55Q8BT07 462 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 MypopQ8R4U1 393 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Cnot6lQ8VEG6 555 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Terf2ipQ91VL8 393 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Chd1lQ9CXF7 900 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Tspoap1Q7TNF8 1846 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Sned1Q70E20 1403 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Cacna1fQ9JIS7 1985 aa9.33□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Ccdc112A0AUP1 442 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Cyp26a1O55127 497 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Smarcc1P97496 1104 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Nap1l3Q794H2 544 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 DekQ7TNV0 380 aaKnown RBP9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Tmem143Q8VD26 458 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Zbtb43Q9DAI4 467 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Eif4enif1Q9EST3 983 aaKnown RBP9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Cfap73J3QPZ5 306 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Epha2Q03145 977 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 LyarQ08288 388 aaKnown RBP9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Cfap157Q0VFX2 523 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Ppp2r5bQ6PD28 497 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Samm50Q8BGH2 469 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Rbm43Q99J64 343 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 CltaO08585 235 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Clec11aO88200 328 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Spty2d1Q68FG3 682 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Oxsr1Q6P9R2 527 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Sept9Q80UG5 583 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 AllcQ9JHX6 414 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Btaf1E9QAE3 1848 aa9.32□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Mtcl1Q3UHU5 1945 aa9.31□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Kansl3A2RSY1 903 aaKnown RBP9.31□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Kcnd1Q03719 651 aa9.31□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 MyrflQ3UN70 904 aa9.31□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Gm28047Q3US59 414 aa9.31□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Tuft1O08970 390 aa9.31□□□□□ -0.92
Ccdc60-201ENSMUST00000050178 Ppfibp2O35711 882 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms