RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 SfpqQ8VIJ6 699 aaKnown RBP18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Nlgn1Q99K10 843 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Usp19Q3UJD6 1360 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 NsmfQ99NF2 532 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Plekho1Q9JIY0 408 aa18.81■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Atg4a-psA0A0G2JFS9 396 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Atg4aQ8C9S8 396 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 DymQ8CHY3 669 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Dnm1P39053 867 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Rassf6Q80UQ2 353 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Bicdl2Q8CHW5 507 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Filip1Q9CS72 1211 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Diaph2O70566 1098 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ppp1r10Q80W00 888 aaKnown RBP18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Kdm3aQ6PCM1 1323 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Hfm1D3Z4R1 1434 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Samsn1P57725 372 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ppp4r3aQ6P2K6 820 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Bicd1Q8BR07 835 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Tsnaxip1Q99P25 704 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Kiaa1107Q80TK0 1369 aa18.8■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Gbp6A0A0G2JDV3 611 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Rasal2E9PW37 1286 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Gm43302L7N1X8 611 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Bach1P97302 739 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ppp1r21Q3TDD9 780 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 ThemisQ8BGW0 636 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 RpsaP14206 295 aaKnown RBP18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Rab44Q8CB87 725 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 LgsnQ8CIX8 563 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 NpcdF8VQB8 469 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Pabpn1lQ5XFR0 273 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 SympkQ80X82 1284 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Erbb4Q61527 1308 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Plcb3P51432 1234 aaKnown RBP18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Prkab2Q6PAM0 271 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Lman1Q9D0F3 517 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Irx5Q9JKQ4 484 aa18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Prpf40aQ9R1C7 953 aaKnown RBP18.79■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Abca16E9PWJ7 1678 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Fam160b2Q80YR2 744 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Ccdc172Q810N9 267 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Q8VDP2 222 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Osbpl5Q9ER64 874 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Spa17Q62252 149 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Lrrc8aQ80WG5 810 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Krt23Q99PS0 422 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Cbfa2t2O70374 594 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 RragbQ6NTA4 374 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Slc39a6Q8C145 765 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Vps16Q920Q4 839 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Traf3ip1Q149C2 625 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 ParvgQ9ERD8 331 aa18.78■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Tm6sf1P58749 370 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Luc7l2Q7TNC4 392 aaKnown RBP18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Lrrfip2Q91WK0 415 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Sh2d4bA6X942 431 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Rnf168Q80XJ2 565 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Nek11Q8C0Q4 628 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Cyb5rlB1AS42 316 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Gm6583E9Q8Z1 469 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Sptlc2P97363 560 aaKnown RBP18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Stk38lQ7TSE6 464 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Arhgap18Q8K0Q5 663 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Zbtb43Q9DAI4 467 aa18.77■□□□□ 0.6
Col17a1-201ENSMUST00000026045 Lmod1Q8BVA4 595 aa18.77■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Fam213aQ9CYH2 218 aa18.77■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Antxr1Q9CZ52 562 aa18.77■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Rufy3Q9D394 469 aa18.77■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Stag1Q9D3E6 1258 aa18.77■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Gm15262A0A140LIQ5 728 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ccdc174Q3U155 467 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ccdc25Q78PG9 208 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 EcsitQ9QZH6 435 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Usp54Q8BL06 1588 aaKnown RBP18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 AnkarA2RT91 1465 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ddx23D3Z0M9 819 aaKnown RBP18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Dync1i2O88487 612 aaKnown RBP18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Surf6P70279 355 aaKnown RBP18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Vps54Q5SPW0 977 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Wdr44Q6NVE8 915 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 PdclQ9DBX2 301 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Stk36Q69ZM6 1316 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Sox13Q04891 613 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Mxra7Q9CZH7 178 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Sept3Q9Z1S5 350 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Tarbp1E9Q368 1579 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Swap70Q6A028 585 aaKnown RBP18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 LnpkQ7TQ95 425 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Iws1Q8C1D8 766 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Bag2Q91YN9 210 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ncapd2Q8K2Z4 1392 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Nckap5lQ6GQX2 1323 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Map3k9Q3U1V8 1077 aa18.76■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Stx8O88983 236 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ift20Q61025 132 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Sec62Q8BU14 398 aaKnown RBP18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Taco1Q8K0Z7 294 aaKnown RBP18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Izumo3A6PWV3 263 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Efcab14Q8BGQ6 484 aa18.75■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms