RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Hdhd2Q3UGR5 259 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 HellsQ60848 821 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Smarcc2Q6PDG5 1213 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Lonrf3Q9D4H7 753 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Appbp2Q9DAX9 585 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Ccdc148Q6P5U8 527 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 RalylQ8BTF8 293 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Tfcp2Q9ERA0 502 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Rassf4Q8CB96 322 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Phkg2Q9DB30 406 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 Naa16Q9DBB4 864 aa14.4□□□□□ -0.1
Msh6-201ENSMUST00000005503 TsksO54887 585 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Dmrt2Q8BG36 561 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ehd2Q8BH64 543 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Erlin1Q91X78 346 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 SsbP32067 415 aaKnown RBP14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ctdnep1Q3TP92 244 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Lrrcc1Q69ZB0 1026 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Trim56Q80VI1 734 aaKnown RBP14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ppp2r2cQ8BG02 447 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 DpydQ8CHR6 1025 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Atp10aO54827 1508 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 EmbP21995 330 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Tmem143Q8VD26 458 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 ChmQ9QXG2 665 aa14.39□□□□□ -0.11
Msh6-201ENSMUST00000005503 Igbp1Q61249 340 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ubn2Q80WC1 1314 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Itsn2Q9Z0R6 1659 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Dctn1O08788 1281 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 CrklP47941 303 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ctdspl2Q8BG15 465 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ccdc122Q8BVN0 290 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Yeats2Q3TUF7 1407 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Krt39Q6IFX4 482 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ncoa5Q91W39 579 aaKnown RBP14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 PdclQ9DBX2 301 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Golga5Q9QYE6 729 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 IkQ9Z1M8 557 aaKnown RBP14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Cyp26a1O55127 497 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Traf3ip1Q149C2 625 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ccdc129Q14B48 1034 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Tbc1d2bQ3U0J8 965 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Cc2d1bQ8BRN9 848 aa14.38□□□□□ -0.11
Msh6-201ENSMUST00000005503 Als2cr12Q8BVM7 383 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Exoc1Q8R3S6 894 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Pdcd6ipQ9WU78 869 aaKnown RBP14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Syde2E9PUP1 1314 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Zfp597E9Q6S0 419 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Nlrp9aQ66X03 949 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ppm1eQ80TL0 749 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Nod2Q8K3Z0 1020 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Klf15Q9EPW2 415 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Cnnm2Q3TWN3 875 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ap5z1Q3U829 807 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 TxlnbQ8VBT1 685 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ddx41Q91VN6 622 aaKnown RBP14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Pcdhb22Q91XZ8 794 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 ParvgQ9ERD8 331 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Zcchc17Q9ESX4 241 aaKnown RBP14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Add2Q9QYB8 725 aa14.37□□□□□ -0.11
Msh6-201ENSMUST00000005503 Gm20425E9Q035 978 aaKnown RBP14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 MarcksP26645 309 aaKnown RBP14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 SrprbP47758 269 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ssrp1Q08943 708 aaKnown RBP14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ifit1bl2Q3U687 466 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Kif2bQ8C0N1 668 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Golph3lQ8R088 285 aaKnown RBP14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Uso1Q9Z1Z0 959 aaKnown RBP14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Mast3Q3U214 1321 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ddx17Q501J6 650 aaKnown RBP14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ccdc172Q810N9 267 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Pde5aQ8CG03 865 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Abcc3B2RX12 1523 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Arhgap23Q69ZH9 1483 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Gm43638A0A0J9YU36 694 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Casp1P29452 402 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Asic4Q7TNS7 539 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Dusp10Q9ESS0 483 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Kdm3aQ6PCM1 1323 aa14.36□□□□□ -0.11
Msh6-201ENSMUST00000005503 Atad2Q8CDM1 1040 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Enc1O35709 589 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 LtkP08923 888 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Nbr1P97432 988 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Lrrfip1Q3UZ39 729 aaKnown RBP14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Cep131Q62036 1060 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 NapgQ9CWZ7 312 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Magi2Q9WVQ1 1275 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Palm3A2TJV2 734 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Asic1Q6NXK8 526 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Jmjd4Q8BFT6 427 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 CoblQ5NBX1 1337 aaKnown RBP14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 NpcdF8VQB8 469 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Asic3Q6X1Y6 530 aa14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Sec62Q8BU14 398 aaKnown RBP14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Ufl1Q8CCJ3 793 aaKnown RBP14.35□□□□□ -0.11
Msh6-201ENSMUST00000005503 Fam186bD3Z420 943 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 ChkbO55229 394 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 PpardP35396 440 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Gdap1l1Q8VE33 370 aa14.34□□□□□ -0.11
Msh6-201ENSMUST00000005503 Rnf17Q99MV7 1640 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 77.8 ms