RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ABCA12Q86UK0 2595 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 NAV2Q8IVL1 2488 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 G3V3Q6 166 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 L7N2F9 121 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 TXNL1O43396 289 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 HPRT1P00492 218 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 MSMBP08118 114 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 CT45A6P0DMU7 189 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 CT45A5P0DMU8 189 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 CT45A7P0DMV0 189 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 COX7A1P24310 79 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 LPAR6P43657 344 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 BRWD1-AS2P59051 145 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 PAX8Q06710 450 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 FGL1Q08830 312 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 LSM10Q969L4 123 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 OR10C1Q96KK4 312 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 C2orf50Q96LR7 162 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 SPIN2AQ99865 258 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 SPIN2BQ9BPZ2 258 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 PCGF1Q9BSM1 259 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 REG4Q9BYZ8 158 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 PLEKHA2Q9HB19 425 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 APCP25054 2843 aa11.57□□□□□ -0.56
CLTCL1-212ENST00000622493 RAMP3O60896 148 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 GATA3P23771 443 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 LINC00205P59089 165 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 TGIF2LXQ8IUE1 241 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 SEC22AQ96IW7 307 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 LPAR2Q9HBW0 351 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 PFDN2Q9UHV9 154 aa11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 FASNP49327 2511 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-212ENST00000622493 TRAV20A0A0B4J274 112 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 MFSD2BA6NFX1 497 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 MPTX1A8MV57 137 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 ODF3BA8MYP8 253 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 TSPAN4O14817 238 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 FCGR3BO75015 233 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 IGKV1-39P01597 117 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 IGKV1D-39P04432 117 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 SLC25A6P12236 298 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 HTR1DP28221 377 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 CEACAM3P40198 252 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 DLX1P56177 255 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 IAH1Q2TAA2 248 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 NMSQ5H8A3 153 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 DHRS7BQ6IAN0 325 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 HCP5Q6MZN7 132 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 FAM219AQ8IW50 185 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 ZNF383Q8NA42 475 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 OR5AN1Q8NGI8 311 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 RRNAD1Q96FB5 475 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 COMMD9Q9P000 198 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 POLQO75417 2590 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 HMSDA8MTL9 139 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 RNASEK-C17orf49H0YIS7 233 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 GAPDHP04406 335 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 ARG1P05089 322 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 HOXB4P17483 251 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 UBE2E1P51965 193 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 ZNF816Q0VGE8 651 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 IL15RAQ13261 267 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 RTL8BQ17RB0 113 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 OR2B11Q5JQS5 317 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 SCARB1Q8WTV0 552 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 TBX15Q96SF7 602 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 DPM3Q9P2X0 92 aa11.55□□□□□ -0.56
CLTCL1-212ENST00000622493 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 LY6LH3BQJ8 138 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 S1PR2O95136 353 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 APOA2P02652 100 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 EPHA1P21709 976 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 MC5RP33032 325 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 AKR1C2P52895 323 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 MINOS1Q5TGZ0 78 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 RNASE11Q8TAA1 199 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 PPP1R1CQ8WVI7 109 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 RPEQ96AT9 228 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 WDR89Q96FK6 387 aaPredicted RBP11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 Q96MF0 132 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 FOXC2Q99958 501 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 MRPL20Q9BYC9 149 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 ZFP57Q9NU63 452 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 MMP24Q9Y5R2 645 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 MINOS1-NBL1R4GNA1 71 aa11.54□□□□□ -0.56
CLTCL1-212ENST00000622493 A0A1B0GU03 582 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 NQO2P16083 231 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 S100A11P31949 105 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 RAB13P51153 203 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 ARHGDIBP52566 201 aa11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 PRB3Q04118 309 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-212ENST00000622493 PCNPQ8WW12 178 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms