RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 RSRP1Q9BUV0 290 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 TINAGL1Q9GZM7 467 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF355PQ9NSJ1 428 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 SLC35D1Q9NTN3 355 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 ADAM30Q9UKF2 790 aa6.54□□□□□ -1.36
CAPN3-213ENST00000565173 PLECQ15149 4684 aaKnown RBP6.54□□□□□ -1.36
CAPN3-213ENST00000565173 TRBV6-7A0A0A0MS04 114 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 A0A0G2JLM5 398 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 LCE6AA0A183 80 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 ANKRD34BA5PLL1 514 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 BET1O15155 118 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 FABP7O15540 132 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 ARL6IP5O75915 188 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 APOA2P02652 100 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 CSN3P07498 182 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 CALRP27797 417 aaKnown RBP6.53□□□□□ -1.36
CAPN3-213ENST00000565173 SERPINB10P48595 397 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 SYNJ2BPP57105 145 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 DEFA5Q01523 94 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 TRAM1Q15629 374 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 NEDD8Q15843 81 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 TMEM177Q53S58 311 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 TSPAN14Q8NG11 270 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 DDB2Q92466 427 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 TMEM68Q96MH6 324 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 CABLES2Q9BTV7 478 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 SIGLEC8Q9NYZ4 499 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 PEF1Q9UBV8 284 aaKnown RBP6.53□□□□□ -1.36
CAPN3-213ENST00000565173 ZNF230Q9UIE0 474 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-213ENST00000565173 RAB22AQ9UL26 194 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 V9GY05 133 aa6.53□□□□□ -1.36
CAPN3-213ENST00000565173 IGKV1D-8A0A087WSZ0 117 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 A0A087WXM4 84 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 IZUMO1RA6ND01 250 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 RAB27BO00194 218 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 DIRAS3O95661 229 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 FCGR3AP08637 254 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 GNB3P16520 340 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 AADACP22760 399 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 PSMA1P25786 263 aaKnown RBP6.52□□□□□ -1.37
CAPN3-213ENST00000565173 TAGLNQ01995 201 aaKnown RBP6.52□□□□□ -1.37
CAPN3-213ENST00000565173 SSX1Q16384 188 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 HAGHQ16775 308 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 HES5Q5TA89 166 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 UBE2UQ5VVX9 321 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 ZFAND6Q6FIF0 208 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 ADAMTSL5Q6ZMM2 481 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 TEX45Q8NA69 505 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 ADAD2Q8NCV1 583 aaKnown RBP6.52□□□□□ -1.37
CAPN3-213ENST00000565173 BVESQ8NE79 360 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 OR10J5Q8NHC4 309 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 MAFIPQ8WZ33 124 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 RAB3CQ96E17 227 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 USMG5Q96IX5 58 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 HARBI1Q96MB7 349 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 OR2D2Q9H210 308 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 VCX3AQ9NNX9 186 aa6.52□□□□□ -1.37
CAPN3-213ENST00000565173 TRBV9A0A0B4J1U6 114 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 LINC00473A8K010 186 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 H0Y980 276 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 MFNGO00587 321 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 SHOXO15266 292 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 APELAP0DMC3 54 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
CAPN3-213ENST00000565173 PSMD7P51665 324 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 OR10A3P58181 314 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 UBE2KP61086 200 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 ZNF45Q02386 682 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 PRSS8Q16651 343 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 LINC00322Q6ZN03 302 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-213ENST00000565173 IDO2Q6ZQW0 420 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 Q6ZS49 121 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 SGPP2Q8IWX5 399 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 OR10R2Q8NGX6 335 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 PALMDQ9NP74 551 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 NDUFB11Q9NX14 153 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 COA4Q9NYJ1 87 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 DMRT1Q9Y5R6 373 aa6.51□□□□□ -1.37
CAPN3-213ENST00000565173 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 A0A0B4J203 849 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 TRAV1-2A0A0B4J238 106 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 IFITM5A6NNB3 132 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 BMPR1BO00238 502 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 OR2A4O95047 310 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 IGLV2-14P01704 120 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 PRH1P02810 166 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 RRASP10301 218 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 HIST1H1DP16402 221 aaKnown RBP6.5□□□□□ -1.37
CAPN3-213ENST00000565173 RAB6AP20340 208 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 RTL8BQ17RB0 113 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 NR2C2APQ86WQ0 139 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 H1FOOQ8IZA3 346 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-213ENST00000565173 Q8N402 240 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 SRSF12Q8WXF0 261 aaKnown RBP6.5□□□□□ -1.37
CAPN3-213ENST00000565173 ISOC1Q96CN7 298 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms