RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 SNAP29O95721 258 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 OR4A8P0C604 315 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 NQO2P16083 231 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 AKR1C4P17516 323 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 ZNF117Q03924 483 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 USF2Q15853 346 aaPredicted RBP1.56□□□□□ -2.16
GMDS-206ENST00000530075 YIPF7Q8N8F6 280 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 SERPINB11Q96P15 392 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 OR52B2Q96RD2 323 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 METTL17Q9H7H0 456 aaPredicted RBP1.56□□□□□ -2.16
GMDS-206ENST00000530075 TONSLQ96HA7 1378 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 RIC1Q4ADV7 1423 aa1.56□□□□□ -2.16
GMDS-206ENST00000530075 COL4A1P02462 1669 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 ECM29Q5VYK3 1845 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 C5orf42Q9H799 3197 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 MUC21A0A0G2JKD1 596 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 A0A0G2JQZ4 141 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 MUC21A0A140T8X8 626 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 B4DEV8 164 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 SGCEO43556 437 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 CDK14O94921 469 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 SLC35E2BP0CK96 405 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 SYT1P21579 422 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 PSMA1P25786 263 aaKnown RBP1.55□□□□□ -2.16
GMDS-206ENST00000530075 UGT2B10P36537 528 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 MAGEA6P43360 314 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 PRDX4Q13162 271 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 RAB31Q13636 194 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 KRTAP21-3Q3LHN1 58 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 DTD1Q8TEA8 209 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 RORBQ92753 470 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 GTF2H4Q92759 462 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 GALMQ96C23 342 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 UPK3BQ9BT76 320 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 UPF3BQ9BZI7 483 aaKnown RBP1.55□□□□□ -2.16
GMDS-206ENST00000530075 BDP1A6H8Y1 2624 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 PTPRJQ12913 1337 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 CR1P17927 2039 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 RTL1A6NKG5 1358 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 COL1A1P02452 1464 aaPredicted RBP1.55□□□□□ -2.16
GMDS-206ENST00000530075 CFAP54Q96N23 3096 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 ZDBF2Q9HCK1 2354 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 TTC28Q96AY4 2481 aa1.55□□□□□ -2.16
GMDS-206ENST00000530075 HELZ2Q9BYK8 2649 aaKnown RBP1.54□□□□□ -2.16
GMDS-206ENST00000530075 PSME4Q14997 1843 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 PHIPQ8WWQ0 1821 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 WDFY4Q6ZS81 3184 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 CDH23Q9H251 3354 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 SULT1C2O00338 296 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 ATF1P18846 271 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 RWDD2BP57060 319 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 GABARAPL2P60520 117 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 ZBTB6Q15916 424 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 TMEM249Q2WGJ8 235 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 C2orf73Q8N5S3 287 aaPredicted RBP1.54□□□□□ -2.16
GMDS-206ENST00000530075 EBNA1BP2Q99848 306 aaKnown RBP1.54□□□□□ -2.16
GMDS-206ENST00000530075 SLC19A3Q9BZV2 496 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 TREM1Q9NP99 234 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 EVC2Q86UK5 1308 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 COL4A6Q14031 1691 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 NCOR1O75376 2440 aa1.54□□□□□ -2.16
GMDS-206ENST00000530075 A0A1W2PP64 1363 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 GP1BAP07359 652 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 GZMBP10144 247 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 CTSEP14091 401 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 NQO1P15559 274 aaKnown RBP1.53□□□□□ -2.16
GMDS-206ENST00000530075 TMED1Q13445 227 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 MDC1Q14676 2089 aaKnown RBP1.53□□□□□ -2.16
GMDS-206ENST00000530075 PAFAH1B3Q15102 231 aaKnown RBP1.53□□□□□ -2.16
GMDS-206ENST00000530075 ANGPT1Q15389 498 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 RALGAPA2Q2PPJ7 1873 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 HENMT1Q5T8I9 393 aaKnown RBP1.53□□□□□ -2.16
GMDS-206ENST00000530075 LGALS9CQ6DKI2 356 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 SETXQ7Z333 2677 aaKnown RBP1.53□□□□□ -2.16
GMDS-206ENST00000530075 VN1R4Q7Z5H5 301 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 SYCE1Q8N0S2 351 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 C17orf78Q8N4C9 275 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 ANGPTL6Q8NI99 470 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 DCANP1Q8TF63 244 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 OPTNQ96CV9 577 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 SMDT1Q9H4I9 107 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 DMAC2Q9NW81 257 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 SCML1Q9UN30 329 aa1.53□□□□□ -2.16
GMDS-206ENST00000530075 REV3LO60673 3130 aa1.53□□□□□ -2.17
GMDS-206ENST00000530075 DSCAML1Q8TD84 2053 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 ANKRD36CQ5JPF3 1778 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 DCHS1Q96JQ0 3298 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 EDC4Q6P2E9 1401 aaKnown RBP1.52□□□□□ -2.17
GMDS-206ENST00000530075 FLT4P35916 1363 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 SPTBN4Q9H254 2564 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 EFCAB9A8MZ26 197 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 GPR171O14626 319 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 LIMS3P0CW19 117 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 LIMS4P0CW20 117 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 RCVRNP35243 200 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 ACTR1BP42025 376 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 LPAR6P43657 344 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 SYCP1Q15431 976 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 LRRC26Q2I0M4 334 aa1.52□□□□□ -2.17
GMDS-206ENST00000530075 MRPL51Q4U2R6 128 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms