RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-216	ENST00000521918	CT45A7	P0DMV0	189 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	GNB3	P16520	340 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	GADD45A	P24522	165 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	CNTFR	P26992	372 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	RANBP1	P43487	201 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	NDP	Q00604	133 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	DEFA6	Q01524	100 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	RPL39P5	Q59GN2	51 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	C9orf152	Q5JTZ5	239 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	SFXN4	Q6P4A7	337 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918		Q6ZS49	121 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	C18orf65	Q6ZTR6	163 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	SLC35E3	Q7Z769	313 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	TPRA1	Q86W33	373 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	STPG2	Q8N412	459 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	WFDC9	Q8NEX5	89 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	NPB	Q8NG41	125 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	OR4F17	Q8NGA8	305 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	OR4A4P	Q8NGN8	299 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	LGALS14	Q8TCE9	139 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	MYOZ3	Q8TDC0	251 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	CHPT1	Q8WUD6	406 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	IL1F10	Q8WWZ1	152 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	SLC25A38	Q96DW6	304 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	RAB3C	Q96E17	227 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	RNF125	Q96EQ8	232 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	OR4F4	Q96R69	305 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	CMSS1	Q9BQ75	279 aa	Known RBP	4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	ZNF107	Q9UII5	783 aa	Predicted RBP	4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	LINC00527	Q9UJ94	153 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	ELF5	Q9UKW6	265 aa	Predicted RBP	4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	COL7A1	Q02388	2944 aa		4.63	□□□□□ -1.67
SPIDR-216	ENST00000521918	IGKV1D-8	A0A087WSZ0	117 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	TRBV6-7	A0A0A0MS04	114 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	IGHV7-81	A0A0B4J1V7	117 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	TCRBV4S1A1T	A0A5B7	111 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	OR5H14	A6NHG9	310 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	NCBP2L	A6PVI3	153 aa	Known RBP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	TRDC	B7Z8K6	153 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	RAB29	O14966	203 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	NBR2	O15453	112 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	FABP7	O15540	132 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	NUDT3	O95989	172 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	CD3G	P09693	182 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	NPS	P0C0P6	89 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	DTYMK	P23919	212 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	ZBTB25	P24278	435 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	SDC2	P34741	201 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	TGFBR1	P36897	503 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	CRIP2	P52943	208 aa	Predicted RBP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	ACTB	P60709	375 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	RPL23A	P62750	156 aa	Known RBP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	MMD	Q15546	238 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	NEDD8	Q15843	81 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	C5orf64	Q2M2E5	130 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	IGSF11	Q5DX21	431 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	RNASE12	Q5GAN4	147 aa	Known RBP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	FAM131A	Q6UXB0	335 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	ZNF329	Q86UD4	541 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	OR4X2	Q8NGF9	303 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	SETD6	Q8TBK2	473 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	MAFIP	Q8WZ33	124 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	ABHD14B	Q96IU4	210 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	KCTD7	Q96MP8	289 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	PIPOX	Q9P0Z9	390 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	DAPK2	Q9UIK4	370 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	SSR3	Q9UNL2	185 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	FBXO7	Q9Y3I1	522 aa		4.62	□□□□□ -1.67
SPIDR-216	ENST00000521918	TNC	P24821	2201 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	METTL21EP	A6NDL7	271 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	ATP6V0E1	O15342	81 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	SSX5	O60225	188 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	RBBP9	O75884	186 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	TNFAIP8	O95379	198 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	IGHG4	P01861	327 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	IGKV1-16	P04430	117 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	GSTT2	P0CG29	244 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	GSTT2B	P0CG30	244 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	CD36	P16671	472 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	PSMB8	P28062	276 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	SOX6	P35712	828 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	CEACAM6	P40199	344 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	SERPINB10	P48595	397 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	LINC00205	P59089	165 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	SUMO2	P61956	95 aa	Known RBP	4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	SSBP2	P81877	361 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	KIAA0141	Q14154	515 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	KIR2DS1	Q14954	304 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	ZNF260	Q3ZCT1	412 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	CDNF	Q49AH0	187 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	HACD4	Q5VWC8	232 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	FOXRED2	Q8IWF2	684 aa		4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-216	ENST00000521918	COMMD1	Q8N668	190 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms