RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 OR10R2Q8NGX6 335 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 GRPEL2Q8TAA5 225 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 RHOVQ96L33 236 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 GINS4Q9BRT9 223 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 DCUN1D5Q9BTE7 237 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 ST6GALNAC5Q9BVH7 336 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 ELOVL1Q9BW60 279 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 ATG5Q9H1Y0 275 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 SLC35D1Q9NTN3 355 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 ZNF230Q9UIE0 474 aaPredicted RBP4.97□□□□□ -1.61
TCF4-228ENST00000565393 GAB2Q9UQC2 676 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 SMAD5-AS1Q9Y6J3 95 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 U3KQK5 164 aa4.97□□□□□ -1.61
TCF4-228ENST00000565393 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 IGHV4OR15-8A0A075B7B6 117 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 A0A087WW49 117 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 TRAV1-2A0A0B4J238 106 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 TMEM272A0A1B0GTI8 110 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 ANKRD34BA5PLL1 514 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 ERICH4A6NGS2 130 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 MSGN1A6NI15 193 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 IFITM5A6NNB3 132 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 FOXI3A8MTJ6 420 aaPredicted RBP4.96□□□□□ -1.62
TCF4-228ENST00000565393 SHOXO15266 292 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 LGALS1P09382 135 aaKnown RBP4.96□□□□□ -1.62
TCF4-228ENST00000565393 SPNP16150 400 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 GNB3P16520 340 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 RAB3BP20337 219 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 HSPA13P48723 471 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 PITPNAQ00169 270 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 NDPQ00604 133 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 TATDN3Q17R31 274 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 MOGAT2Q3SYC2 334 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 CDNFQ49AH0 187 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 ASPHD1Q5U4P2 390 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 C22orf42Q6IC83 251 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 CD200R1LQ6Q8B3 271 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 IZUMO2Q6UXV1 221 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 PDPNQ86YL7 162 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 MYOZ3Q8TDC0 251 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 MAFIPQ8WZ33 124 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 ARPC1AQ92747 370 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 PHB2Q99623 299 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 CENPOQ9BU64 300 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 RSRP1Q9BUV0 290 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 TOLLIPQ9H0E2 274 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 OR2D2Q9H210 308 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 SLA2Q9H6Q3 261 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 RANGRFQ9HD47 186 aaPredicted RBP4.96□□□□□ -1.62
TCF4-228ENST00000565393 BLOC1S6Q9UL45 172 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 KCNK7Q9Y2U2 307 aa4.96□□□□□ -1.62
TCF4-228ENST00000565393 VWFP04275 2813 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 A0A0B4J203 849 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 A0A0G2JLM5 398 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 TRDV1A0A1B0GX56 115 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 SMIM30A4D0T7 59 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 ARPC1BO15143 372 aaKnown RBP4.95□□□□□ -1.62
TCF4-228ENST00000565393 LDLRAD4O15165 306 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 MPPED1O15442 326 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 PLXNB1O43157 2135 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 TUSC2O75896 110 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 FCGR3AP08637 254 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 APELAP0DMC3 54 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 RRASP10301 218 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 GP9P14770 177 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 HIST1H1DP16402 221 aaKnown RBP4.95□□□□□ -1.62
TCF4-228ENST00000565393 RAB6AP20340 208 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 CRIP2P52943 208 aaPredicted RBP4.95□□□□□ -1.62
TCF4-228ENST00000565393 TAGLNQ01995 201 aaKnown RBP4.95□□□□□ -1.62
TCF4-228ENST00000565393 PJVKQ0ZLH3 352 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 SSX1Q16384 188 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 SRSF7Q16629 238 aaKnown RBP eCLIP4.95□□□□□ -1.62
TCF4-228ENST00000565393 RTL8BQ17RB0 113 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 C19orf54Q5BKX5 351 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 ACSM6Q6P461 480 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 ZNF367Q7RTV3 350 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 OVCH2Q7RTZ1 564 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 ANKRD13BQ86YJ7 626 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 SBSPONQ8IVN8 264 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.95□□□□□ -1.62
TCF4-228ENST00000565393 OR6Q1Q8NGQ2 317 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 TPSG1Q9NRR2 321 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 SDHAF2Q9NX18 166 aa4.95□□□□□ -1.62
TCF4-228ENST00000565393 TRBV6-7A0A0A0MS04 114 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 SRRM4A7MD48 611 aaKnown RBP4.94□□□□□ -1.62
TCF4-228ENST00000565393 RAB27BO00194 218 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 ACTL6BO94805 426 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 SPDEFO95238 335 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 CTXN2P0C2S0 81 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 ZP3P21754 424 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 PSMB9P28065 219 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 ARL6IP1Q15041 203 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 TBCEQ15813 527 aaPredicted RBP4.94□□□□□ -1.62
TCF4-228ENST00000565393 TNXAQ16473 311 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 VMA21Q3ZAQ7 101 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 HAPLN4Q86UW8 402 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 POC5Q8NA72 575 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 ACOT12Q8WYK0 555 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 ADTRPQ96IZ2 230 aa4.94□□□□□ -1.62
TCF4-228ENST00000565393 HARBI1Q96MB7 349 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms