RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 PLXNB1O43157 2135 aa11.21□□□□□ -0.62
TIMP1-205ENST00000456754 LINC00854A0A1B0GVQ3 168 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 RNF212BA8MTL3 300 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 CSF1P09603 554 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 FAM106CPP0CH98 169 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 PI3P19957 117 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 PTBP1P26599 531 aaKnown RBP eCLIP11.2□□□□□ -0.62
TIMP1-205ENST00000456754 ARHGDIBP52566 201 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 PPP5CP53041 499 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 BRWD1-AS2P59051 145 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 SSBP1Q04837 148 aaKnown RBP11.2□□□□□ -0.62
TIMP1-205ENST00000456754 EBI3Q14213 229 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 SCGB2B2Q4G0G5 96 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 ACTBL2Q562R1 376 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 LHFPL1Q86WI0 220 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 BVESQ8NE79 360 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 DDB2Q92466 427 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 PLSCR3Q9NRY6 295 aa11.2□□□□□ -0.62
TIMP1-205ENST00000456754 H7C2Y5 167 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 OR2F2O95006 317 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 MOSP00540 346 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 AKAIN1P0CW23 69 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 HIST2H2BDQ6DRA6 164 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 OR51S1Q8NGJ8 323 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 ZNF702PQ9H963 129 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 HRASLSQ9HDD0 168 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 SLC35D1Q9NTN3 355 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 ZNF107Q9UII5 783 aaPredicted RBP11.19□□□□□ -0.62
TIMP1-205ENST00000456754 WASHC3Q9Y3C0 194 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
TIMP1-205ENST00000456754 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
TIMP1-205ENST00000456754 IFNA6P05013 189 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 HKR1P10072 659 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 TBPP20226 339 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 MDKP21741 143 aaPredicted RBP11.18□□□□□ -0.62
TIMP1-205ENST00000456754 ZNF45Q02386 682 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 ABCA11PQ4W5N1 156 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 C5orf56Q8N8D9 126 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 GDPD1Q8N9F7 314 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 Q8N9W7 124 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 MARCH1Q8TCQ1 289 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 GHITMQ9H3K2 345 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 MCUBQ9NWR8 336 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
TIMP1-205ENST00000456754 LINC01548A6NM66 108 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
TIMP1-205ENST00000456754 RAMP3O60896 148 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 FCGR3BO75015 233 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 RLN1P04808 185 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 CRYBA1P05813 215 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 IL7P13232 177 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 THBS3P49746 956 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 RAG2P55895 527 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
TIMP1-205ENST00000456754 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 KCTD9Q7L273 389 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 TOMM5Q8N4H5 51 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 ARRDC1Q8N5I2 433 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 OR51H1Q8NH63 302 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 ZFAND2BQ8WV99 257 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 TCTEX1D2Q8WW35 142 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 MOB4Q9Y3A3 225 aa11.17□□□□□ -0.62
TIMP1-205ENST00000456754 PGLYRP1O75594 196 aaPredicted RBP11.16□□□□□ -0.62
TIMP1-205ENST00000456754 CRYZL1O95825 349 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 IGLV2-23P01705 113 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 APOA2P02652 100 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 VSIG10L2P0DP72 767 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 PGAM2P15259 253 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 MEF2DQ14814 521 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 MMDQ15546 238 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 TRIQKQ629K1 86 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 C11orf88Q6PI97 169 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 TERB2Q8NHR7 220 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 HSPB9Q9BQS6 159 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 FBXL15Q9H469 300 aa11.16□□□□□ -0.62
TIMP1-205ENST00000456754 TMEM89A2RUT3 159 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 DISC1C4P0D8 188 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 GPR31O00270 319 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 FCN1O00602 326 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 TSPAN9O75954 239 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 CD40LGP29965 261 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 MC5RP33032 325 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 KRTAP10-3P60369 221 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 RPS16P62249 146 aaKnown RBP11.15□□□□□ -0.62
TIMP1-205ENST00000456754 SRSF4Q08170 494 aaKnown RBP11.15□□□□□ -0.62
TIMP1-205ENST00000456754 IDO2Q6ZQW0 420 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 PDPNQ86YL7 162 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 VKORC1L1Q8N0U8 176 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 FAM71E2Q8N5Q1 922 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 LINC01006Q8NI28 216 aa11.15□□□□□ -0.62
TIMP1-205ENST00000456754 HSD17B10Q99714 261 aaKnown RBP11.15□□□□□ -0.62
TIMP1-205ENST00000456754 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms