RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KCNAB3O43448 404 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 XRCC3O43542 346 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 SSX5O60225 188 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 RBBP9O75884 186 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 OPN1MWP04001 364 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 OPN1MW2P0DN77 364 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 OPN1MW3P0DN78 364 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 SOX6P35712 828 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 MMDQ15546 238 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 H1FOOQ8IZA3 346 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-208ENST00000626828 NPBQ8NG41 125 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 OR4X2Q8NGF9 303 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-208ENST00000626828 RITA1Q96K30 269 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 GON7Q9BXV9 100 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 AUNIPQ9H7T9 357 aa13.24□□□□□ -0.29
UBE3D-208ENST00000626828 TCRBV4S1A1TA0A5B7 111 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 LINC01548A6NM66 108 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 H0YJW9 148 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 H7C2Y5 167 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 AP4M1O00189 453 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 NBR2O15453 112 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 TSPAN15O95858 294 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 TFAP2AP05549 437 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 ALDH3B2P48448 385 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 RORCP51449 518 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 SLC35B1P78383 322 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 UBE2NLQ5JXB2 153 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 HIST2H2BDQ6DRA6 164 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 FAM131AQ6UXB0 335 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 GLDNQ6ZMI3 551 aaPredicted RBP13.23□□□□□ -0.29
UBE3D-208ENST00000626828 SAMD12Q8N8I0 201 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 RBMXL1Q96E39 390 aaKnown RBP13.23□□□□□ -0.29
UBE3D-208ENST00000626828 CMTM3Q96MX0 182 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
UBE3D-208ENST00000626828 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 ANXA10Q9UJ72 324 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 WASHC3Q9Y3C0 194 aa13.23□□□□□ -0.29
UBE3D-208ENST00000626828 M0R1X1 148 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 CBX5P45973 191 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
UBE3D-208ENST00000626828 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 LIN54Q6MZP7 749 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 GPR141Q7Z602 305 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 STPG2Q8N412 459 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 COMMD1Q8N668 190 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 DRAXINQ8NBI3 349 aaPredicted RBP13.22□□□□□ -0.29
UBE3D-208ENST00000626828 OR4F17Q8NGA8 305 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 ACOT12Q8WYK0 555 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 OR2D2Q9H210 308 aa13.22□□□□□ -0.29
UBE3D-208ENST00000626828 TSSC4Q9Y5U2 329 aaPredicted RBP13.22□□□□□ -0.29
UBE3D-208ENST00000626828 SMIM31A0A1B0GVY4 71 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 GABARAPO95166 117 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 CTF1Q16619 201 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 TCTEX1D4Q5JR98 221 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 ZNF329Q86UD4 541 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 HOGA1Q86XE5 327 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 ZNF383Q8NA42 475 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 BEST4Q8NFU0 473 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 SDHAF2Q9NX18 166 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 COMMD3Q9UBI1 195 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.29
UBE3D-208ENST00000626828 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 OR2W1Q9Y3N9 320 aa13.21□□□□□ -0.29
UBE3D-208ENST00000626828 ADARB2-AS1A8MUL3 147 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 SLC22A5O76082 557 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 NDUFA3O95167 84 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 HLA-DQB1P01920 261 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 APOA2P02652 100 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 CNTFRP26992 372 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 LUMP51884 338 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-208ENST00000626828 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
UBE3D-208ENST00000626828 C10orf99Q6UWK7 81 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 R3HDM4Q96D70 268 aa13.2□□□□□ -0.3
UBE3D-208ENST00000626828 NAA50Q9GZZ1 169 aaKnown RBP13.2□□□□□ -0.3
UBE3D-208ENST00000626828 RRHO14718 337 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 HLA-DRB1P01911 266 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 APOA1P02647 267 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 IGF1P05019 195 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 NFYAP23511 347 aaPredicted RBP13.19□□□□□ -0.3
UBE3D-208ENST00000626828 LGALS7P47929 136 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 LINC00205P59089 165 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 ARPC4P59998 168 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 TMEM69Q5SWH9 247 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 TEX38Q6PEX7 206 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 PDPNQ86YL7 162 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 GVQW1Q8N7I0 195 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 FLYWCH2Q96CP2 140 aaKnown RBP13.19□□□□□ -0.3
UBE3D-208ENST00000626828 ADTRPQ96IZ2 230 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 TSNAXQ99598 290 aaKnown RBP13.19□□□□□ -0.3
UBE3D-208ENST00000626828 HSPB9Q9BQS6 159 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 SLC35D1Q9NTN3 355 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 ZFP57Q9NU63 452 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 ZNF580Q9UK33 172 aa13.19□□□□□ -0.3
UBE3D-208ENST00000626828 J3QRK9 145 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 OR5H8P0DN80 308 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms