RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 H7C2Y5 167 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 IGHG2P01859 326 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 CTF1Q16619 201 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 KHDC1LQ5JSQ8 128 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 GPR141Q7Z602 305 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 ANKRD13BQ86YJ7 626 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 H1FOOQ8IZA3 346 aaPredicted RBP11.04□□□□□ -0.64
DDX41-212ENST00000511040 FAM71E2Q8N5Q1 922 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 GVQW1Q8N7I0 195 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 ZNF383Q8NA42 475 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 OR8H1Q8NGG4 311 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 C5orf30Q96GV9 206 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 TOLLIPQ9H0E2 274 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 ABCG5Q9H222 651 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 DCSTAMPQ9H295 470 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 MMP27Q9H306 513 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
DDX41-212ENST00000511040 COMMD3Q9UBI1 195 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 RBM7Q9Y580 266 aaKnown RBP11.04□□□□□ -0.64
DDX41-212ENST00000511040 WNK1Q9H4A3 2382 aa11.04□□□□□ -0.64
DDX41-212ENST00000511040 A0A0A6YYH2 397 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 MEIS3P1A6NDR6 274 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 A6NJ64 397 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 NBR2O15453 112 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 TMEM127O75204 238 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 GABARAPO95166 117 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 TFAP2AP05549 437 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
DDX41-212ENST00000511040 NFYAP23511 347 aaPredicted RBP11.03□□□□□ -0.64
DDX41-212ENST00000511040 SOX6P35712 828 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 NDUFA11Q86Y39 141 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 FOXRED2Q8IWF2 684 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 S100A16Q96FQ6 103 aaKnown RBP11.03□□□□□ -0.64
DDX41-212ENST00000511040 GHITMQ9H3K2 345 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 SDHAF2Q9NX18 166 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 ANXA10Q9UJ72 324 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 WASHC3Q9Y3C0 194 aa11.03□□□□□ -0.64
DDX41-212ENST00000511040 PKD1L1Q8TDX9 2849 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 OR5H14A6NHG9 310 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 XRCC3O43542 346 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 DIRAS3O95661 229 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 CD83Q01151 205 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 CNIH2Q6PI25 160 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 STPG2Q8N412 459 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 OR5AN1Q8NGI8 311 aa11.02□□□□□ -0.65
DDX41-212ENST00000511040 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
DDX41-212ENST00000511040 ZNF107Q9UII5 783 aaPredicted RBP11.02□□□□□ -0.65
DDX41-212ENST00000511040 AP4M1O00189 453 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 HPGDSO60760 199 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 IGKV1-16P04430 117 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 CTXN2P0C2S0 81 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 MC5RP33032 325 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 RORCP51449 518 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 TAS2R20P59543 309 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 C5orf64Q2M2E5 130 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 HOGA1Q86XE5 327 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.01□□□□□ -0.65
DDX41-212ENST00000511040 BEST4Q8NFU0 473 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 NPBQ8NG41 125 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 CHPT1Q8WUD6 406 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 R3HDM4Q96D70 268 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 FBXL15Q9H469 300 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
DDX41-212ENST00000511040 VWFP04275 2813 aa11□□□□□ -0.65
DDX41-212ENST00000511040 MGAM2Q2M2H8 2515 aa11□□□□□ -0.65
DDX41-212ENST00000511040 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
DDX41-212ENST00000511040 KCNAB3O43448 404 aa11□□□□□ -0.65
DDX41-212ENST00000511040 APOA2P02652 100 aa11□□□□□ -0.65
DDX41-212ENST00000511040 OPN1MWP04001 364 aa11□□□□□ -0.65
DDX41-212ENST00000511040 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
DDX41-212ENST00000511040 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
DDX41-212ENST00000511040 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
DDX41-212ENST00000511040 ARPC4P59998 168 aa11□□□□□ -0.65
DDX41-212ENST00000511040 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
DDX41-212ENST00000511040 PLGLAQ15195 96 aa11□□□□□ -0.65
DDX41-212ENST00000511040 CLVS1Q8IUQ0 354 aaPredicted RBP11□□□□□ -0.65
DDX41-212ENST00000511040 PARP11Q9NR21 331 aa11□□□□□ -0.65
DDX41-212ENST00000511040 SLC35D1Q9NTN3 355 aa11□□□□□ -0.65
DDX41-212ENST00000511040 GAB2Q9UQC2 676 aa11□□□□□ -0.65
DDX41-212ENST00000511040 MRPS7Q9Y2R9 242 aaKnown RBP11□□□□□ -0.65
DDX41-212ENST00000511040 OR2W1Q9Y3N9 320 aa11□□□□□ -0.65
DDX41-212ENST00000511040 IGHV7-81A0A0B4J1V7 117 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 FCN1O00602 326 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 RRHO14718 337 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 NDUFA3O95167 84 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
DDX41-212ENST00000511040 SLC35B1P78383 322 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 SPCS2Q15005 226 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 LIN54Q6MZP7 749 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 LCNL1Q6ZST4 164 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 C18orf65Q6ZTR6 163 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 BVESQ8NE79 360 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 SNAPC3Q92966 411 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 CLCC1Q96S66 551 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 IFT46Q9NQC8 304 aa10.99□□□□□ -0.65
DDX41-212ENST00000511040 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms