RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 GNG2P59768 71 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 VBP1P61758 197 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 MMDQ15546 238 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 H1FOOQ8IZA3 346 aaPredicted RBP13.16□□□□□ -0.3
VRK2-204ENST00000428021 DRAXINQ8NBI3 349 aaPredicted RBP13.16□□□□□ -0.3
VRK2-204ENST00000428021 NPBQ8NG41 125 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 OR8U1Q8NH10 309 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 CHPT1Q8WUD6 406 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 SLC25A46Q96AG3 418 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 C5orf30Q96GV9 206 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 NAA50Q9GZZ1 169 aaKnown RBP13.16□□□□□ -0.3
VRK2-204ENST00000428021 ZNF221Q9UK13 617 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 GAB2Q9UQC2 676 aa13.16□□□□□ -0.3
VRK2-204ENST00000428021 PSMB11A5LHX3 300 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 OR5H14A6NHG9 310 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 NDUFA3O95167 84 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 STPG2Q8N412 459 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 ZNF383Q8NA42 475 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.15□□□□□ -0.3
VRK2-204ENST00000428021 AUNIPQ9H7T9 357 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
VRK2-204ENST00000428021 TCRBV4S1A1TA0A5B7 111 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 AP4M1O00189 453 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 NBR2O15453 112 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 PLXNB1O43157 2135 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 TFAP2AP05549 437 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 PTHLHP12272 177 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 MC5RP33032 325 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 SOX6P35712 828 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 ALDH3B2P48448 385 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 CTF1Q16619 201 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 FOXRED2Q8IWF2 684 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 GINS4Q9BRT9 223 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 MRPS26Q9BYN8 205 aaKnown RBP13.14□□□□□ -0.31
VRK2-204ENST00000428021 OR2D2Q9H210 308 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 SDHAF2Q9NX18 166 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 ZNF107Q9UII5 783 aaPredicted RBP13.14□□□□□ -0.31
VRK2-204ENST00000428021 WASHC3Q9Y3C0 194 aa13.14□□□□□ -0.31
VRK2-204ENST00000428021 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 M0R1X1 148 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 KCNAB3O43448 404 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 XRCC3O43542 346 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 GABARAPO95166 117 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 OPN1MWP04001 364 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 OPN1MW2P0DN77 364 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 OPN1MW3P0DN78 364 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 CNIH2Q6PI25 160 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 SAMD12Q8N8I0 201 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
VRK2-204ENST00000428021 ANXA10Q9UJ72 324 aa13.13□□□□□ -0.31
VRK2-204ENST00000428021 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
VRK2-204ENST00000428021 H7C2Y5 167 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 HLA-DRB1P01911 266 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 IGKV1-16P04430 117 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 CTXN2P0C2S0 81 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 CFHR3Q02985 330 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 GPR107Q5VW38 600 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 R3HDM4Q96D70 268 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 S100A16Q96FQ6 103 aaKnown RBP13.12□□□□□ -0.31
VRK2-204ENST00000428021 RNF5Q99942 180 aa13.12□□□□□ -0.31
VRK2-204ENST00000428021 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 RRHO14718 337 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 RBBP9O75884 186 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 IGF1P05019 195 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 NFYAP23511 347 aaPredicted RBP13.11□□□□□ -0.31
VRK2-204ENST00000428021 HOGA1Q86XE5 327 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 FBXL15Q9H469 300 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 ZNF580Q9UK33 172 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 OR2W1Q9Y3N9 320 aa13.11□□□□□ -0.31
VRK2-204ENST00000428021 J3QRK9 145 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 FCN1O00602 326 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 TUSC2O75896 110 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 HLA-DQB1P01920 261 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 EIF4EP06730 217 aaKnown RBP13.1□□□□□ -0.31
VRK2-204ENST00000428021 SLC35B1P78383 322 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 PSG5Q15238 335 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 PDPNQ86YL7 162 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 COMMD1Q8N668 190 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 OR51J1Q9H342 316 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 KIAA1456Q9P272 454 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 RBM7Q9Y580 266 aaKnown RBP13.1□□□□□ -0.31
VRK2-204ENST00000428021 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
VRK2-204ENST00000428021 IGKV1D-13A0A0B4J2D9 117 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 IGLV2-14P01704 120 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 APOA2P02652 100 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 FCER2P06734 321 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 IGKV1-13P0DP09 117 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 TAS2R20P59543 309 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 RPL23AP62750 156 aaKnown RBP13.09□□□□□ -0.31
VRK2-204ENST00000428021 NDPQ00604 133 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms