RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DTYMKP23919 212 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 KIR2DS1Q14954 304 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 GPR107Q5VW38 600 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 LCNL1Q6ZST4 164 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 C18orf65Q6ZTR6 163 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 C1QL4Q86Z23 238 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 FAM71E2Q8N5Q1 922 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 SAMD12Q8N8I0 201 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 ZNF383Q8NA42 475 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 OR10J5Q8NHC4 309 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 EDARADDQ8WWZ3 215 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 SLC25A46Q96AG3 418 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 RASL11BQ9BPW5 248 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 GINS4Q9BRT9 223 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 MRPS26Q9BYN8 205 aaKnown RBP6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 ABCG5Q9H222 651 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 LIN7CQ9NUP9 197 aaKnown RBP6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 SDHAF2Q9NX18 166 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 ZNF107Q9UII5 783 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 ZNF221Q9UK13 617 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 SPATA2Q9UM82 520 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 DNAH3Q8TD57 4116 aa6.05□□□□□ -1.44
HMGB3P1-201ENST00000393368 MGAM2Q2M2H8 2515 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 TCRBV4S1A1TA0A5B7 111 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 NBR2O15453 112 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 GABARAPO95166 117 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 IGKV1-16P04430 117 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 TFAP2AP05549 437 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 EIF4EP06730 217 aaKnown RBP6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 SOX6P35712 828 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 CD83Q01151 205 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 CTF1Q16619 201 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 UBE2NLQ5JXB2 153 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 FAM71F2Q6NXP2 309 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 NDUFA11Q86Y39 141 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 FOXRED2Q8IWF2 684 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 H1FOOQ8IZA3 346 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 STPG2Q8N412 459 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 OR4X2Q8NGF9 303 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 PHF21AQ96BD5 680 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 R3HDM4Q96D70 268 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 CLCC1Q96S66 551 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 TOLLIPQ9H0E2 274 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 FBXL15Q9H469 300 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 AUNIPQ9H7T9 357 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 TPSG1Q9NRR2 321 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 COMMD3Q9UBI1 195 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 ANXA10Q9UJ72 324 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 WASHC3Q9Y3C0 194 aa6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 RBM7Q9Y580 266 aaKnown RBP6.04□□□□□ -1.44
HMGB3P1-201ENST00000393368 IGKV1D-13A0A0B4J2D9 117 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 OR5H14A6NHG9 310 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 G3V318 75 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 FCN1O00602 326 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 HPGDSO60760 199 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 SCGNO76038 276 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 IGKV1-13P0DP09 117 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 ALDH3B2P48448 385 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 SCAND1P57086 179 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 TAS2R20P59543 309 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 NDPQ00604 133 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 ARL6IP1Q15041 203 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 PNLIPRP3Q17RR3 467 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 OR2B11Q5JQS5 317 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 TMEM69Q5SWH9 247 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 Q6ZS49 121 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 GPR141Q7Z602 305 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 ANKRD13BQ86YJ7 626 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 CROCCP3Q8IVE0 287 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 OR8H1Q8NGG4 311 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 OR5AN1Q8NGI8 311 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 CASTOR1Q8WTX7 329 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 SNAPC3Q92966 411 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 GPHA2Q96T91 129 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 DCSTAMPQ9H295 470 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 PARP11Q9NR21 331 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 DIABLOQ9NR28 239 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 SLC35D1Q9NTN3 355 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 GAB2Q9UQC2 676 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 FBXO7Q9Y3I1 522 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 WSB1Q9Y6I7 421 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 A3GALT2U3KPV4 340 aa6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 TET2Q6N021 2002 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P1-201ENST00000393368 IGHV7-81A0A0B4J1V7 117 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 LINC00473A8K010 186 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 G3V4G9 280 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 AP4M1O00189 453 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 RRHO14718 337 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 ATP6V0E1O15342 81 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 KCNAB3O43448 404 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 XRCC3O43542 346 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 NDUFA3O95167 84 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 IGLV2-14P01704 120 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 HLA-DRB1P01911 266 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 APOA2P02652 100 aa6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 RPLP1P05386 114 aaKnown RBP6.02□□□□□ -1.45
HMGB3P1-201ENST00000393368 PF4V1P10720 104 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms