RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Igsf11P0C673 428 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Sf3b6P59708 125 aaKnown RBP9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 UbdP63072 162 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Kcnj3P63250 501 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Apoc2Q05020 97 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Igfbp5Q07079 271 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Myl12bQ3THE2 172 aaKnown RBP9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 AbraclQ4KML4 81 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Lrrc52Q5M8M9 314 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Zfp663Q6NXM6 656 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Sox21Q811W0 276 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Klhl26Q8BGY4 606 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Olfr1250Q8VGM3 314 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Olfr57Q8VGU7 319 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Wdr89Q9D0R9 386 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Tmbim6Q9D2C7 237 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Cmtm2aQ9DAR1 169 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 MycbpQ9EQS3 103 aa9.9□□□□□ -0.82
Ccdc28a-202ENSMUST00000080860 Gm28778A0A087WSK7 233 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 CtcflA2APF3 636 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 2610001J05RikF2Z3Y9 59 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Vmn2r58K7N6V2 862 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Cd74P04441 279 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Hspb1P14602 209 aaKnown RBP9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Foxa2P35583 459 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Il11P47873 199 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Rpl29P47915 160 aaKnown RBP9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Gabarapl2P60521 117 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Htr2bQ02152 479 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Gm773Q3TML4 206 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Gm12258Q5NC63 627 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Sap30lQ5SQF8 182 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Il15raQ60819 263 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Srsf2Q62093 221 aaKnown RBP9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Tas2r143Q7TQB9 293 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr1252Q7TQZ2 314 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 SprnQ8BWU1 147 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Zfp874aQ8BX23 447 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Gm4763Q8CFJ5 196 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Vmn1r201Q8R262 300 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 V1ra11Q8R2E6 318 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Cysltr2Q920A1 309 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Txndc17Q9CQM5 123 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Rpl14Q9CR57 217 aaKnown RBP9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Rnase10Q9D5A9 208 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 AgkQ9ESW4 421 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 TpbgQ9Z0L0 426 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Gm3550W4VSN7 160 aa9.89□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 ApcQ61315 2845 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr1192-ps1A0A1L1SRD7 309 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Smok4aA0JLX3 433 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Ddi2A2ADY9 399 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Gm379J3QQ19 296 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr194L7N1Y8 306 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Zfp977L7N2E7 438 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Onecut1O08755 465 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Bcl6bO88282 474 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 P01643 108 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Mtnd4P03911 459 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 LtaP09225 202 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Tpsb2P21845 276 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 MgmtP26187 211 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Lhx4P53776 390 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 CpeQ00493 476 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Rab42Q0PD08 215 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Zfp936Q3ULA8 456 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 ScimpQ3UU41 150 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Magee2Q52KG3 523 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Syce1lQ5D525 247 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Sntb2Q61235 520 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Ppp3r1Q63810 170 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 BC061212Q6P8K3 481 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 CapslQ6P8Y1 208 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Nudt15Q8BG93 170 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 GldnQ8BMF8 549 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 4922502D21RikQ8C634 189 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Neil1Q8K4Q6 389 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Vmn1r4Q8R2D3 297 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Zmynd11Q8R5C8 602 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 As3mtQ91WU5 376 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Adarb1Q91ZS8 711 aaKnown RBP9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Prss37Q9DAA4 237 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Cpn2Q9DBB9 547 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Ubqln2Q9QZM0 638 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Fbln5Q9WVH9 448 aa9.88□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr455A0A0B4J1M2 317 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Sac3d1A6H687 427 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr231E9Q0M4 307 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr1471F6QVZ8 314 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 H2-M11F6U8V3 335 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Oosp3G5E8D7 195 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Prdx6O08709 224 aaKnown RBP9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Prkar1bP12849 381 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Meox1P32442 253 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Olfr143P34985 313 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Igfbp3P47878 292 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Cd7P50283 210 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 CebpdQ00322 268 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Zfp386Q1WWJ5 626 aa9.87□□□□□ -0.83
Ccdc28a-202ENSMUST00000080860 Q3TEI4 1023 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms