RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Vmn1r124D3YTX4 307 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Gm5458L7N219 204 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 EhfO70273 300 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Tcstv3O70518 169 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Masp1P98064 704 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Olfr1442Q0VEV7 312 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 NmsQ5H8A1 153 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Btn1a1Q62556 524 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 SdhbQ9CQA3 282 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Cyb5bQ9CQX2 146 aaKnown RBP17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Cacna1aP97445 2368 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Ankrd65F6YK91 380 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Casp16-psI6L890 176 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Olfr895L7N210 316 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Cd46O88174 365 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Gm9125P0DMR6 365 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 LtbP41155 306 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Fabp2P55050 132 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Lrrc52Q5M8M9 314 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Rnf144bQ8BKD6 301 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Lpar6Q8BMC0 344 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Lrrc20Q8CI70 184 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Thyn1Q91YJ3 226 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Atg5Q99J83 275 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Rbm7Q9CQT2 265 aaKnown RBP17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Med13Q5SWW4 2171 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Vps13cQ8BX70 3748 aa17.47■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 MsmpB1AWI6 139 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Ly6g6fB2RXM6 300 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Gm6460F6YJZ8 199 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Ca6P18761 317 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Sdc1P18828 311 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 MpzP27573 248 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Zfp61Q923D1 555 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Rtn4rQ99PI8 473 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 DhdhQ9DBB8 333 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Nprl2Q9WUE4 380 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Angptl4Q9Z1P8 410 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Gm13769A2ATW2 309 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 2010315B03RikJ3QK55 433 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Vmn1r121K7N6J4 314 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 GamtO35969 236 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 P04945 108 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Tacr3P47937 452 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Anxa7Q07076 463 aaKnown RBP17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 C1ql4Q4ZJM9 238 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Slc25a26Q5U680 274 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Snapc5Q8R2K7 98 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Olfr539Q8VGL9 319 aa17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 SlirpQ9D8T7 112 aaKnown RBP17.46■□□□□ 0.39
Ctdsp1-201ENSMUST00000027367 Gm21761J3QK00 171 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Gfi1bO70237 330 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Rnase11Q5GAM9 192 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr890Q7TRD9 314 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Sh2d7Q8BI17 458 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr1459Q8VFV9 307 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr1201Q8VGF5 307 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Mapk7Q9WVS8 806 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Apc2Q9Z1K7 2274 aa17.46■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Dchs1E9PVD3 3291 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Cacna1gQ5SUF7 2381 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr1039A2ARY0 319 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Efna4O08542 206 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Slc45a2P58355 530 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr142Q60881 305 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Foxg1Q60987 481 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Fam180aQ8BR21 173 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr1392Q8VFA6 311 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Borcs8Q9D6Y4 120 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 NgfrQ9Z0W1 417 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Urb1Q571H0 2274 aaKnown RBP17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Gm17677B3GLJ5 116 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Amy2a1E9PV85 245 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Bcl2l2P70345 193 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 UcnP81615 122 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Il9rQ01114 468 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Rbmxl1Q91VM5 388 aaKnown RBP17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Q9CQM1 111 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Ube2v2Q9D2M8 145 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Znf593Q9DB42 134 aaKnown RBP17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 SclyQ9JLI6 432 aa17.45■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Jmjd1cQ69ZK6 2350 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 1700015F17RikD3YUK8 150 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Rabl2E9Q9D5 223 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Vmn2r30K7N5W1 852 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Vmn2r47K7N709 852 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 B2mP01887 119 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 MgmtP26187 211 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Pcbd1P61458 104 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 TMEM229BQ8BFQ2 167 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Aqp11Q8BHH1 271 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Vash1Q8C1W1 375 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 BivmQ8CBX9 502 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 SccpdhQ8R127 429 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 SdhdQ9CXV1 159 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Rpl7l1Q9D8M4 246 aaKnown RBP17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Vmn1r5B2RQT2 315 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Olfr250E9PV37 331 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 4931429L15RikE9PVU2 379 aa17.44■□□□□ 0.38
Ctdsp1-201ENSMUST00000027367 Saa2P05367 122 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms