Protein–RNA interactions for Protein: Q8BI17

Sh2d7, SH2 domain-containing protein 7, mousemouse

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d7Q8BI17 Gm25239-201ENSMUST00000174915 86 ntBASIC33.06■■■□□ 2.88
Sh2d7Q8BI17 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Sh2d7Q8BI17 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Sh2d7Q8BI17 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Sh2d7Q8BI17 Gm15042-201ENSMUST00000120212 883 ntBASIC29.1■■■□□ 2.25
Sh2d7Q8BI17 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Sh2d7Q8BI17 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Sh2d7Q8BI17 Gm24109-201ENSMUST00000175489 103 ntBASIC28.54■■■□□ 2.16
Sh2d7Q8BI17 Gm15045-201ENSMUST00000117359 883 ntBASIC28.49■■■□□ 2.15
Sh2d7Q8BI17 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sh2d7Q8BI17 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sh2d7Q8BI17 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sh2d7Q8BI17 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Sh2d7Q8BI17 Psd-208ENSMUST00000224556 2034 ntBASIC27.66■■■□□ 2.02
Sh2d7Q8BI17 Gm23366-201ENSMUST00000175022 89 ntBASIC27.62■■■□□ 2.01
Sh2d7Q8BI17 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Sh2d7Q8BI17 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.44■■□□□ 1.98
Sh2d7Q8BI17 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Sh2d7Q8BI17 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Sh2d7Q8BI17 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Sh2d7Q8BI17 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Sh2d7Q8BI17 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Sh2d7Q8BI17 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sh2d7Q8BI17 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sh2d7Q8BI17 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
Sh2d7Q8BI17 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Sh2d7Q8BI17 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Sh2d7Q8BI17 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sh2d7Q8BI17 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sh2d7Q8BI17 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.76■■□□□ 1.87
Sh2d7Q8BI17 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.74■■□□□ 1.87
Sh2d7Q8BI17 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sh2d7Q8BI17 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sh2d7Q8BI17 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.44■■□□□ 1.82
Sh2d7Q8BI17 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sh2d7Q8BI17 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.38■■□□□ 1.81
Sh2d7Q8BI17 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sh2d7Q8BI17 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
Sh2d7Q8BI17 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh2d7Q8BI17 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sh2d7Q8BI17 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh2d7Q8BI17 Gm25238-201ENSMUST00000174914 89 ntBASIC26.03■■□□□ 1.76
Sh2d7Q8BI17 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sh2d7Q8BI17 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.96■■□□□ 1.75
Sh2d7Q8BI17 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh2d7Q8BI17 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sh2d7Q8BI17 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh2d7Q8BI17 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.88■■□□□ 1.73
Sh2d7Q8BI17 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sh2d7Q8BI17 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.71■■□□□ 1.71
Sh2d7Q8BI17 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh2d7Q8BI17 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Sh2d7Q8BI17 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sh2d7Q8BI17 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sh2d7Q8BI17 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Sh2d7Q8BI17 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sh2d7Q8BI17 Gm27325-201ENSMUST00000175467 74 ntBASIC25.53■■□□□ 1.68
Sh2d7Q8BI17 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.53■■□□□ 1.68
Sh2d7Q8BI17 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Sh2d7Q8BI17 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
Sh2d7Q8BI17 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sh2d7Q8BI17 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.4■■□□□ 1.66
Sh2d7Q8BI17 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.35■■□□□ 1.65
Sh2d7Q8BI17 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sh2d7Q8BI17 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sh2d7Q8BI17 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sh2d7Q8BI17 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Sh2d7Q8BI17 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sh2d7Q8BI17 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sh2d7Q8BI17 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.2■■□□□ 1.62
Sh2d7Q8BI17 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.19■■□□□ 1.62
Sh2d7Q8BI17 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sh2d7Q8BI17 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Sh2d7Q8BI17 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh2d7Q8BI17 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sh2d7Q8BI17 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.06■■□□□ 1.6
Sh2d7Q8BI17 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Sh2d7Q8BI17 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sh2d7Q8BI17 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.99■■□□□ 1.59
Sh2d7Q8BI17 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sh2d7Q8BI17 Rab21-202ENSMUST00000218831 843 ntBASIC24.92■■□□□ 1.58
Sh2d7Q8BI17 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sh2d7Q8BI17 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.88■■□□□ 1.57
Sh2d7Q8BI17 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sh2d7Q8BI17 Gm25262-201ENSMUST00000174934 133 ntBASIC24.81■■□□□ 1.56
Sh2d7Q8BI17 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.81■■□□□ 1.56
Sh2d7Q8BI17 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.77■■□□□ 1.56
Sh2d7Q8BI17 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh2d7Q8BI17 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sh2d7Q8BI17 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sh2d7Q8BI17 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh2d7Q8BI17 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sh2d7Q8BI17 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Sh2d7Q8BI17 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.61■■□□□ 1.53
Sh2d7Q8BI17 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh2d7Q8BI17 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.6■■□□□ 1.53
Sh2d7Q8BI17 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sh2d7Q8BI17 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sh2d7Q8BI17 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh2d7Q8BI17 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms