Protein–RNA interactions for Protein: J3QK55

2010315B03Rik, RIKEN cDNA 2010315B03 gene, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2010315B03RikJ3QK55 Gm25239-201ENSMUST00000174915 86 ntBASIC32.77■■■□□ 2.84
2010315B03RikJ3QK55 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
2010315B03RikJ3QK55 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
2010315B03RikJ3QK55 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
2010315B03RikJ3QK55 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
2010315B03RikJ3QK55 Gm15042-201ENSMUST00000120212 883 ntBASIC29.02■■■□□ 2.24
2010315B03RikJ3QK55 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
2010315B03RikJ3QK55 Gm15045-201ENSMUST00000117359 883 ntBASIC28.44■■■□□ 2.14
2010315B03RikJ3QK55 Gm24109-201ENSMUST00000175489 103 ntBASIC28.24■■■□□ 2.11
2010315B03RikJ3QK55 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
2010315B03RikJ3QK55 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
2010315B03RikJ3QK55 Psd-208ENSMUST00000224556 2034 ntBASIC27.68■■■□□ 2.02
2010315B03RikJ3QK55 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
2010315B03RikJ3QK55 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.59■■■□□ 2.01
2010315B03RikJ3QK55 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
2010315B03RikJ3QK55 Gm23366-201ENSMUST00000175022 89 ntBASIC27.45■■□□□ 1.98
2010315B03RikJ3QK55 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
2010315B03RikJ3QK55 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
2010315B03RikJ3QK55 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
2010315B03RikJ3QK55 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
2010315B03RikJ3QK55 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
2010315B03RikJ3QK55 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
2010315B03RikJ3QK55 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
2010315B03RikJ3QK55 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
2010315B03RikJ3QK55 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.97■■□□□ 1.91
2010315B03RikJ3QK55 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
2010315B03RikJ3QK55 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
2010315B03RikJ3QK55 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
2010315B03RikJ3QK55 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
2010315B03RikJ3QK55 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
2010315B03RikJ3QK55 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.6■■□□□ 1.85
2010315B03RikJ3QK55 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.58■■□□□ 1.85
2010315B03RikJ3QK55 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
2010315B03RikJ3QK55 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
2010315B03RikJ3QK55 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.17■■□□□ 1.78
2010315B03RikJ3QK55 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
2010315B03RikJ3QK55 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
2010315B03RikJ3QK55 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
2010315B03RikJ3QK55 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
2010315B03RikJ3QK55 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.04■■□□□ 1.76
2010315B03RikJ3QK55 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
2010315B03RikJ3QK55 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
2010315B03RikJ3QK55 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
2010315B03RikJ3QK55 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
2010315B03RikJ3QK55 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.79■■□□□ 1.72
2010315B03RikJ3QK55 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
2010315B03RikJ3QK55 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
2010315B03RikJ3QK55 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.73■■□□□ 1.71
2010315B03RikJ3QK55 Gm25238-201ENSMUST00000174914 89 ntBASIC25.73■■□□□ 1.71
2010315B03RikJ3QK55 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
2010315B03RikJ3QK55 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.7■■□□□ 1.7
2010315B03RikJ3QK55 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
2010315B03RikJ3QK55 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
2010315B03RikJ3QK55 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
2010315B03RikJ3QK55 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
2010315B03RikJ3QK55 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
2010315B03RikJ3QK55 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
2010315B03RikJ3QK55 Gm27325-201ENSMUST00000175467 74 ntBASIC25.51■■□□□ 1.67
2010315B03RikJ3QK55 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
2010315B03RikJ3QK55 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.4■■□□□ 1.66
2010315B03RikJ3QK55 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
2010315B03RikJ3QK55 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
2010315B03RikJ3QK55 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
2010315B03RikJ3QK55 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.35■■□□□ 1.65
2010315B03RikJ3QK55 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
2010315B03RikJ3QK55 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
2010315B03RikJ3QK55 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
2010315B03RikJ3QK55 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.22■■□□□ 1.63
2010315B03RikJ3QK55 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
2010315B03RikJ3QK55 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
2010315B03RikJ3QK55 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
2010315B03RikJ3QK55 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
2010315B03RikJ3QK55 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
2010315B03RikJ3QK55 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.12■■□□□ 1.61
2010315B03RikJ3QK55 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.12■■□□□ 1.61
2010315B03RikJ3QK55 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
2010315B03RikJ3QK55 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.05■■□□□ 1.6
2010315B03RikJ3QK55 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
2010315B03RikJ3QK55 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
2010315B03RikJ3QK55 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.92■■□□□ 1.58
2010315B03RikJ3QK55 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
2010315B03RikJ3QK55 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
2010315B03RikJ3QK55 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
2010315B03RikJ3QK55 Rab21-202ENSMUST00000218831 843 ntBASIC24.82■■□□□ 1.56
2010315B03RikJ3QK55 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
2010315B03RikJ3QK55 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
2010315B03RikJ3QK55 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
2010315B03RikJ3QK55 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
2010315B03RikJ3QK55 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.67■■□□□ 1.54
2010315B03RikJ3QK55 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
2010315B03RikJ3QK55 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.63■■□□□ 1.53
2010315B03RikJ3QK55 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
2010315B03RikJ3QK55 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
2010315B03RikJ3QK55 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
2010315B03RikJ3QK55 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
2010315B03RikJ3QK55 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
2010315B03RikJ3QK55 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
2010315B03RikJ3QK55 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
2010315B03RikJ3QK55 Gm25262-201ENSMUST00000174934 133 ntBASIC24.49■■□□□ 1.51
2010315B03RikJ3QK55 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms