RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 ABRACLQ9P1F3 81 aa12.59□□□□□ -0.39
SFXN2-208ENST00000602660 OR1A1Q9P1Q5 309 aa12.59□□□□□ -0.39
SFXN2-208ENST00000602660 SORL1Q92673 2214 aa12.58□□□□□ -0.39
SFXN2-208ENST00000602660 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.4
SFXN2-208ENST00000602660 MFNGO00587 321 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 SLC2A2P11168 524 aaPredicted RBP12.58□□□□□ -0.4
SFXN2-208ENST00000602660 SDC2P34741 201 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 RANBP1P43487 201 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 GPR12P47775 334 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 LSM3P62310 102 aaKnown RBP12.58□□□□□ -0.4
SFXN2-208ENST00000602660 MXD1Q05195 221 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 BEAN1Q3B7T3 259 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 PDLIM3Q53GG5 364 aaPredicted RBP12.58□□□□□ -0.4
SFXN2-208ENST00000602660 SLC35E3Q7Z769 313 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 TPRA1Q86W33 373 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 OR2AK2Q8NG84 335 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 OR4F17Q8NGA8 305 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 OR4F4Q96R69 305 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 CMSS1Q9BQ75 279 aaKnown RBP12.58□□□□□ -0.4
SFXN2-208ENST00000602660 FUNDC2Q9BWH2 189 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 SLC23A1Q9UHI7 598 aa12.58□□□□□ -0.4
SFXN2-208ENST00000602660 TSSC4Q9Y5U2 329 aaPredicted RBP12.58□□□□□ -0.4
SFXN2-208ENST00000602660 TCRBV4S1A1TA0A5B7 111 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 NOTOA8MTQ0 251 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 ITGB1BP1O14713 200 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 PROP1O75360 226 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 RAB6AP20340 208 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 TGFBR1P36897 503 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 RPL39P5Q59GN2 51 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 KPRPQ5T749 579 aaPredicted RBP12.57□□□□□ -0.4
SFXN2-208ENST00000602660 STPG2Q8N412 459 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 OR8H1Q8NGG4 311 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 OR10R2Q8NGX6 335 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 CHPT1Q8WUD6 406 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 RAB3CQ96E17 227 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 ABHD14BQ96IU4 210 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
SFXN2-208ENST00000602660 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
SFXN2-208ENST00000602660 SERPINE3A8MV23 424 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 CLEC2LP0C7M8 214 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 CNTFRP26992 372 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 ALDH3B2P48448 385 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 C18orf65Q6ZTR6 163 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 GPR141Q7Z602 305 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 PTX4Q96A99 478 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 MGAT4AQ9UM21 535 aa12.56□□□□□ -0.4
SFXN2-208ENST00000602660 FCGR3AP08637 254 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 CT45A6P0DMU7 189 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 CT45A5P0DMU8 189 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 CT45A7P0DMV0 189 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
SFXN2-208ENST00000602660 GNB3P16520 340 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 CEACAM6P40199 344 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 SFXN4Q6P4A7 337 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 ETV3LQ6ZN32 361 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 WFDC9Q8NEX5 89 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 PIPOXQ9P0Z9 390 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 DAPK2Q9UIK4 370 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 SCOCQ9UIL1 159 aa12.55□□□□□ -0.4
SFXN2-208ENST00000602660 ELF5Q9UKW6 265 aaPredicted RBP12.55□□□□□ -0.4
SFXN2-208ENST00000602660 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 AP4M1O00189 453 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 RAB29O14966 203 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 TFAP2AP05549 437 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 CD3GP09693 182 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 ZBTB25P24278 435 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 SERPINB10P48595 397 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 ACTBP60709 375 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 NCS1P62166 190 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 RPL23AP62750 156 aaKnown RBP12.54□□□□□ -0.4
SFXN2-208ENST00000602660 CFHR3Q02985 330 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 MMDQ15546 238 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 FAM131AQ6UXB0 335 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 GLDNQ6ZMI3 551 aaPredicted RBP12.54□□□□□ -0.4
SFXN2-208ENST00000602660 FOXRED2Q8IWF2 684 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 CABLES2Q9BTV7 478 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
SFXN2-208ENST00000602660 ZNF107Q9UII5 783 aaPredicted RBP12.54□□□□□ -0.4
SFXN2-208ENST00000602660 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
SFXN2-208ENST00000602660 A0A075B6Q4 140 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 H0YJW9 148 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 GABARAPO95166 117 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 NDUFA3O95167 84 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 SOX6P35712 828 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 VBP1P61758 197 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 KHDC1LQ5JSQ8 128 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 GPR107Q5VW38 600 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 ANKRD13BQ86YJ7 626 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 NPBQ8NG41 125 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 LGALS14Q8TCE9 139 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
SFXN2-208ENST00000602660 NAA50Q9GZZ1 169 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms