RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TRDCB7Z8K6 153 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 G3V4G9 280 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 H7C2Y5 167 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 AP4M1O00189 453 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 RAB29O14966 203 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 BET1O15155 118 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 LDLRAD4O15165 306 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 PLXNB1O43157 2135 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 IGHG2P01859 326 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 GNB3P16520 340 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 CD33P20138 364 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 RAB6AP20340 208 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 FGF9P31371 208 aaPredicted RBP6.48□□□□□ -1.37
SNX1-207ENST00000559401 SOX6P35712 828 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 ACTBP60709 375 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 KCTD21Q4G0X4 260 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 RPL39P5Q59GN2 51 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 TCTEX1D4Q5JR98 221 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 LY6G6FQ5SQ64 297 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 GLDNQ6ZMI3 551 aaPredicted RBP6.48□□□□□ -1.37
SNX1-207ENST00000559401 ZNF833PQ6ZTB9 187 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 ODF3L1Q8IXM7 274 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 STPG2Q8N412 459 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 MAFIPQ8WZ33 124 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 ABHD14BQ96IU4 210 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 KCTD7Q96MP8 289 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 ABCG5Q9H222 651 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 IFI27L2Q9H2X8 130 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 VCX3AQ9NNX9 186 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 KIAA1456Q9P272 454 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 ZNF107Q9UII5 783 aaPredicted RBP6.48□□□□□ -1.37
SNX1-207ENST00000559401 ZNF221Q9UK13 617 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 RNF150Q9ULK6 438 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 LINC01548A6NM66 108 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 MFNGO00587 321 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 NBR2O15453 112 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 FABP7O15540 132 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 FCGR3AP08637 254 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
SNX1-207ENST00000559401 SNRPBP14678 240 aaKnown RBP6.47□□□□□ -1.37
SNX1-207ENST00000559401 HIST1H1DP16402 221 aaKnown RBP6.47□□□□□ -1.37
SNX1-207ENST00000559401 CD36P16671 472 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 VDAC1P21796 283 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 CNTFRP26992 372 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 SDC2P34741 201 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 F2RL1P55085 397 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 KIR2DS1Q14954 304 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 PLGLAQ15195 96 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 FAM71F2Q6NXP2 309 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 TPRA1Q86W33 373 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 NR2C2APQ86WQ0 139 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 FAM71E2Q8N5Q1 922 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 OR4A4PQ8NGN8 299 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 LGALS14Q8TCE9 139 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 ABHD5Q8WTS1 349 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 PHF21AQ96BD5 680 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 HSPB9Q9BQS6 159 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 GINS4Q9BRT9 223 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 GON7Q9BXV9 100 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 C11orf54Q9H0W9 315 aaPredicted RBP6.47□□□□□ -1.37
SNX1-207ENST00000559401 RNF167Q9H6Y7 350 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 PARP11Q9NR21 331 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 PLSCR3Q9NRY6 295 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 RDH8Q9NYR8 311 aa6.47□□□□□ -1.37
SNX1-207ENST00000559401 ZNF230Q9UIE0 474 aaPredicted RBP6.47□□□□□ -1.37
SNX1-207ENST00000559401 RBM7Q9Y580 266 aaKnown RBP6.47□□□□□ -1.37
SNX1-207ENST00000559401 NOTCH1P46531 2555 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 IGKV1-6A0A0C4DH72 117 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 OR5H14A6NHG9 310 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 M0R1X1 148 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 RAB27BO00194 218 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 TNFAIP8O95379 198 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 APOA2P02652 100 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 CLEC2LP0C7M8 214 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 GSTT2P0CG29 244 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 GSTT2BP0CG30 244 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 SERPINB10P48595 397 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 RPL23AP62750 156 aaKnown RBP6.46□□□□□ -1.38
SNX1-207ENST00000559401 ARL6IP1Q15041 203 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 PDLIM3Q53GG5 364 aaPredicted RBP6.46□□□□□ -1.38
SNX1-207ENST00000559401 OXLD1Q5BKU9 147 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 IGSF11Q5DX21 431 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 CXorf66Q5JRM2 361 aaPredicted RBP6.46□□□□□ -1.38
SNX1-207ENST00000559401 IDNKQ5T6J7 187 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 SFXN4Q6P4A7 337 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 TEX38Q6PEX7 206 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 COMMD1Q8N668 190 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 DRAXINQ8NBI3 349 aaPredicted RBP6.46□□□□□ -1.38
SNX1-207ENST00000559401 KLHL30-AS1Q8NEE0 82 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 OR10J5Q8NHC4 309 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 PTX4Q96A99 478 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 OR2D2Q9H210 308 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 GHITMQ9H3K2 345 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 KCNK7Q9Y2U2 307 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 WASHC3Q9Y3C0 194 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.38
SNX1-207ENST00000559401 A0A087WXM4 84 aa6.45□□□□□ -1.38
SNX1-207ENST00000559401 H0YJW9 148 aa6.45□□□□□ -1.38
SNX1-207ENST00000559401 ITGB1BP1O14713 200 aa6.45□□□□□ -1.38
SNX1-207ENST00000559401 SCGNO76038 276 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms